RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
AC055811.3-201ENST00000584952 ABCC9O60706 1549 aa30.27■■■□□ 2.44
AC055811.3-201ENST00000584952 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
AC055811.3-201ENST00000584952 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
AC055811.3-201ENST00000584952 NACADO15069 1562 aa28.58■■■□□ 2.17
AC055811.3-201ENST00000584952 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
AC055811.3-201ENST00000584952 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
AC055811.3-201ENST00000584952 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
AC055811.3-201ENST00000584952 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
AC055811.3-201ENST00000584952 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
AC055811.3-201ENST00000584952 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
AC055811.3-201ENST00000584952 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
AC055811.3-201ENST00000584952 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
AC055811.3-201ENST00000584952 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
AC055811.3-201ENST00000584952 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
AC055811.3-201ENST00000584952 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
AC055811.3-201ENST00000584952 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
AC055811.3-201ENST00000584952 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
AC055811.3-201ENST00000584952 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
AC055811.3-201ENST00000584952 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
AC055811.3-201ENST00000584952 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
AC055811.3-201ENST00000584952 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
AC055811.3-201ENST00000584952 DNAJC5Q9H3Z4 198 aa26.21■■□□□ 1.79
AC055811.3-201ENST00000584952 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
AC055811.3-201ENST00000584952 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
AC055811.3-201ENST00000584952 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
AC055811.3-201ENST00000584952 CUX2O14529 1486 aa26.1■■□□□ 1.77
AC055811.3-201ENST00000584952 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
AC055811.3-201ENST00000584952 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
AC055811.3-201ENST00000584952 NESP48681 1621 aa25.99■■□□□ 1.75
AC055811.3-201ENST00000584952 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
AC055811.3-201ENST00000584952 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
AC055811.3-201ENST00000584952 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
AC055811.3-201ENST00000584952 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
AC055811.3-201ENST00000584952 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
AC055811.3-201ENST00000584952 WIZO95785 1651 aa25.59■■□□□ 1.69
AC055811.3-201ENST00000584952 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
AC055811.3-201ENST00000584952 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
AC055811.3-201ENST00000584952 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
AC055811.3-201ENST00000584952 WDR62O43379 1518 aa25.36■■□□□ 1.65
AC055811.3-201ENST00000584952 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
AC055811.3-201ENST00000584952 CFTRP13569 1480 aa25.3■■□□□ 1.64
AC055811.3-201ENST00000584952 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
AC055811.3-201ENST00000584952 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
AC055811.3-201ENST00000584952 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
AC055811.3-201ENST00000584952 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
AC055811.3-201ENST00000584952 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
AC055811.3-201ENST00000584952 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
AC055811.3-201ENST00000584952 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
AC055811.3-201ENST00000584952 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
AC055811.3-201ENST00000584952 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
AC055811.3-201ENST00000584952 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
AC055811.3-201ENST00000584952 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
AC055811.3-201ENST00000584952 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
AC055811.3-201ENST00000584952 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
AC055811.3-201ENST00000584952 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
AC055811.3-201ENST00000584952 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
AC055811.3-201ENST00000584952 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
AC055811.3-201ENST00000584952 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
AC055811.3-201ENST00000584952 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
AC055811.3-201ENST00000584952 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
AC055811.3-201ENST00000584952 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
AC055811.3-201ENST00000584952 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
AC055811.3-201ENST00000584952 SOGA1O94964 1423 aa24.47■■□□□ 1.51
AC055811.3-201ENST00000584952 FBLN2P98095 1184 aa24.45■■□□□ 1.5
AC055811.3-201ENST00000584952 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
AC055811.3-201ENST00000584952 CHD1O14646 1710 aa24.41■■□□□ 1.5
AC055811.3-201ENST00000584952 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
AC055811.3-201ENST00000584952 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
AC055811.3-201ENST00000584952 CUX1P39880 1505 aa24.36■■□□□ 1.49
AC055811.3-201ENST00000584952 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
AC055811.3-201ENST00000584952 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
AC055811.3-201ENST00000584952 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
AC055811.3-201ENST00000584952 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
AC055811.3-201ENST00000584952 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
AC055811.3-201ENST00000584952 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
AC055811.3-201ENST00000584952 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
AC055811.3-201ENST00000584952 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
AC055811.3-201ENST00000584952 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
AC055811.3-201ENST00000584952 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
AC055811.3-201ENST00000584952 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
AC055811.3-201ENST00000584952 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
AC055811.3-201ENST00000584952 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
AC055811.3-201ENST00000584952 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
AC055811.3-201ENST00000584952 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
AC055811.3-201ENST00000584952 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
AC055811.3-201ENST00000584952 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
AC055811.3-201ENST00000584952 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
AC055811.3-201ENST00000584952 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
AC055811.3-201ENST00000584952 ADAMTS12P58397 1594 aa23.87■■□□□ 1.41
AC055811.3-201ENST00000584952 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
AC055811.3-201ENST00000584952 NUP160Q12769 1436 aa23.85■■□□□ 1.41
AC055811.3-201ENST00000584952 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
AC055811.3-201ENST00000584952 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
AC055811.3-201ENST00000584952 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
AC055811.3-201ENST00000584952 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
AC055811.3-201ENST00000584952 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
AC055811.3-201ENST00000584952 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
AC055811.3-201ENST00000584952 IGF1RP08069 1367 aa23.54■■□□□ 1.36
AC055811.3-201ENST00000584952 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms