RNA–Protein interactions for RNA: ENST00000584868.1

C19orf47-209, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 2

Gene C19orf47, Length 583 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-209ENST00000584868 NISCHQ9Y2I1 1504 aa36.47■■■■□ 3.43
C19orf47-209ENST00000584868 ABCC9O60706 1549 aa32.59■■■□□ 2.81
C19orf47-209ENST00000584868 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
C19orf47-209ENST00000584868 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
C19orf47-209ENST00000584868 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
C19orf47-209ENST00000584868 NACADO15069 1562 aa30.76■■■□□ 2.52
C19orf47-209ENST00000584868 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
C19orf47-209ENST00000584868 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
C19orf47-209ENST00000584868 UNC13AQ9UPW8 1703 aa30.35■■■□□ 2.45
C19orf47-209ENST00000584868 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
C19orf47-209ENST00000584868 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
C19orf47-209ENST00000584868 BICRAQ9NZM4 1560 aa30.12■■■□□ 2.41
C19orf47-209ENST00000584868 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
C19orf47-209ENST00000584868 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
C19orf47-209ENST00000584868 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
C19orf47-209ENST00000584868 CC2D2AQ9P2K1 1620 aa29.39■■■□□ 2.3
C19orf47-209ENST00000584868 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
C19orf47-209ENST00000584868 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
C19orf47-209ENST00000584868 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
C19orf47-209ENST00000584868 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
C19orf47-209ENST00000584868 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
C19orf47-209ENST00000584868 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
C19orf47-209ENST00000584868 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
C19orf47-209ENST00000584868 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
C19orf47-209ENST00000584868 MROH2BQ7Z745 1585 aa28.17■■■□□ 2.1
C19orf47-209ENST00000584868 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
C19orf47-209ENST00000584868 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
C19orf47-209ENST00000584868 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
C19orf47-209ENST00000584868 NESP48681 1621 aa28.06■■■□□ 2.08
C19orf47-209ENST00000584868 CUX2O14529 1486 aa27.86■■■□□ 2.05
C19orf47-209ENST00000584868 WIZO95785 1651 aa27.86■■■□□ 2.05
C19orf47-209ENST00000584868 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
C19orf47-209ENST00000584868 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
C19orf47-209ENST00000584868 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
C19orf47-209ENST00000584868 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
C19orf47-209ENST00000584868 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
C19orf47-209ENST00000584868 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
C19orf47-209ENST00000584868 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
C19orf47-209ENST00000584868 TOP2AP11388 1531 aaKnown RBP27.44■■□□□ 1.98
C19orf47-209ENST00000584868 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
C19orf47-209ENST00000584868 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
C19orf47-209ENST00000584868 CFTRP13569 1480 aa27.3■■□□□ 1.96
C19orf47-209ENST00000584868 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
C19orf47-209ENST00000584868 WDR62O43379 1518 aa27.29■■□□□ 1.96
C19orf47-209ENST00000584868 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
C19orf47-209ENST00000584868 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
C19orf47-209ENST00000584868 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
C19orf47-209ENST00000584868 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
C19orf47-209ENST00000584868 ZNF608Q9ULD9 1512 aaPredicted RBP26.77■■□□□ 1.88
C19orf47-209ENST00000584868 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
C19orf47-209ENST00000584868 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
C19orf47-209ENST00000584868 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
C19orf47-209ENST00000584868 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
C19orf47-209ENST00000584868 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
C19orf47-209ENST00000584868 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
C19orf47-209ENST00000584868 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
C19orf47-209ENST00000584868 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
C19orf47-209ENST00000584868 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
C19orf47-209ENST00000584868 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
C19orf47-209ENST00000584868 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
C19orf47-209ENST00000584868 CUX1P39880 1505 aa26.44■■□□□ 1.82
C19orf47-209ENST00000584868 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
C19orf47-209ENST00000584868 SOGA1O94964 1423 aa26.43■■□□□ 1.82
C19orf47-209ENST00000584868 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
C19orf47-209ENST00000584868 CHD1O14646 1710 aa26.38■■□□□ 1.81
C19orf47-209ENST00000584868 FBLN2P98095 1184 aa26.36■■□□□ 1.81
C19orf47-209ENST00000584868 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
C19orf47-209ENST00000584868 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
C19orf47-209ENST00000584868 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
C19orf47-209ENST00000584868 ARHGEF11O15085 1522 aa26.27■■□□□ 1.8
C19orf47-209ENST00000584868 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
C19orf47-209ENST00000584868 WDR97A6NE52 1622 aa26.2■■□□□ 1.78
C19orf47-209ENST00000584868 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
C19orf47-209ENST00000584868 CYB5RLQ6IPT4 315 aa26.13■■□□□ 1.77
C19orf47-209ENST00000584868 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
C19orf47-209ENST00000584868 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
C19orf47-209ENST00000584868 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
C19orf47-209ENST00000584868 PBRM1Q86U86 1689 aa26.1■■□□□ 1.77
C19orf47-209ENST00000584868 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
C19orf47-209ENST00000584868 SYNJ1O43426 1573 aa26.06■■□□□ 1.76
C19orf47-209ENST00000584868 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
C19orf47-209ENST00000584868 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
C19orf47-209ENST00000584868 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
C19orf47-209ENST00000584868 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
C19orf47-209ENST00000584868 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
C19orf47-209ENST00000584868 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
C19orf47-209ENST00000584868 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
C19orf47-209ENST00000584868 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
C19orf47-209ENST00000584868 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
C19orf47-209ENST00000584868 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
C19orf47-209ENST00000584868 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
C19orf47-209ENST00000584868 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
C19orf47-209ENST00000584868 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
C19orf47-209ENST00000584868 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
C19orf47-209ENST00000584868 NUP160Q12769 1436 aa25.71■■□□□ 1.71
C19orf47-209ENST00000584868 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
C19orf47-209ENST00000584868 IGF1RP08069 1367 aa25.51■■□□□ 1.67
C19orf47-209ENST00000584868 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
C19orf47-209ENST00000584868 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
C19orf47-209ENST00000584868 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms