RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
PSMD11-210ENST00000584340 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
PSMD11-210ENST00000584340 ABCC9O60706 1549 aa22.51■■□□□ 1.19
PSMD11-210ENST00000584340 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
PSMD11-210ENST00000584340 NACADO15069 1562 aa21.76■■□□□ 1.07
PSMD11-210ENST00000584340 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
PSMD11-210ENST00000584340 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
PSMD11-210ENST00000584340 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
PSMD11-210ENST00000584340 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
PSMD11-210ENST00000584340 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
PSMD11-210ENST00000584340 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
PSMD11-210ENST00000584340 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
PSMD11-210ENST00000584340 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
PSMD11-210ENST00000584340 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
PSMD11-210ENST00000584340 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
PSMD11-210ENST00000584340 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
PSMD11-210ENST00000584340 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
PSMD11-210ENST00000584340 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
PSMD11-210ENST00000584340 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
PSMD11-210ENST00000584340 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
PSMD11-210ENST00000584340 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
PSMD11-210ENST00000584340 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
PSMD11-210ENST00000584340 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
PSMD11-210ENST00000584340 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
PSMD11-210ENST00000584340 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
PSMD11-210ENST00000584340 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
PSMD11-210ENST00000584340 HMGXB3Q12766 1538 aa20■□□□□ 0.79
PSMD11-210ENST00000584340 WIZO95785 1651 aa20■□□□□ 0.79
PSMD11-210ENST00000584340 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
PSMD11-210ENST00000584340 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
PSMD11-210ENST00000584340 NESP48681 1621 aa19.59■□□□□ 0.73
PSMD11-210ENST00000584340 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
PSMD11-210ENST00000584340 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
PSMD11-210ENST00000584340 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
PSMD11-210ENST00000584340 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
PSMD11-210ENST00000584340 CFTRP13569 1480 aa19.47■□□□□ 0.71
PSMD11-210ENST00000584340 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
PSMD11-210ENST00000584340 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
PSMD11-210ENST00000584340 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
PSMD11-210ENST00000584340 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
PSMD11-210ENST00000584340 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
PSMD11-210ENST00000584340 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
PSMD11-210ENST00000584340 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
PSMD11-210ENST00000584340 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
PSMD11-210ENST00000584340 WDR62O43379 1518 aa19.13■□□□□ 0.65
PSMD11-210ENST00000584340 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
PSMD11-210ENST00000584340 CUX2O14529 1486 aa19.11■□□□□ 0.65
PSMD11-210ENST00000584340 TOPBP1Q92547 1522 aa19■□□□□ 0.63
PSMD11-210ENST00000584340 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
PSMD11-210ENST00000584340 CUX1P39880 1505 aa18.95■□□□□ 0.62
PSMD11-210ENST00000584340 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
PSMD11-210ENST00000584340 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
PSMD11-210ENST00000584340 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
PSMD11-210ENST00000584340 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
PSMD11-210ENST00000584340 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
PSMD11-210ENST00000584340 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
PSMD11-210ENST00000584340 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
PSMD11-210ENST00000584340 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
PSMD11-210ENST00000584340 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
PSMD11-210ENST00000584340 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.6
PSMD11-210ENST00000584340 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
PSMD11-210ENST00000584340 SOGA1O94964 1423 aa18.74■□□□□ 0.59
PSMD11-210ENST00000584340 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
PSMD11-210ENST00000584340 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.58
PSMD11-210ENST00000584340 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
PSMD11-210ENST00000584340 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
PSMD11-210ENST00000584340 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
PSMD11-210ENST00000584340 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
PSMD11-210ENST00000584340 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
PSMD11-210ENST00000584340 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
PSMD11-210ENST00000584340 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
PSMD11-210ENST00000584340 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
PSMD11-210ENST00000584340 MAGI1Q96QZ7 1491 aaPredicted RBP18.43■□□□□ 0.54
PSMD11-210ENST00000584340 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
PSMD11-210ENST00000584340 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
PSMD11-210ENST00000584340 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
PSMD11-210ENST00000584340 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
PSMD11-210ENST00000584340 IGF1RP08069 1367 aa18.4■□□□□ 0.54
PSMD11-210ENST00000584340 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
PSMD11-210ENST00000584340 CHD1O14646 1710 aa18.39■□□□□ 0.53
PSMD11-210ENST00000584340 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
PSMD11-210ENST00000584340 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
PSMD11-210ENST00000584340 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
PSMD11-210ENST00000584340 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PSMD11-210ENST00000584340 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
PSMD11-210ENST00000584340 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
PSMD11-210ENST00000584340 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
PSMD11-210ENST00000584340 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
PSMD11-210ENST00000584340 FBLN2P98095 1184 aa18.24■□□□□ 0.51
PSMD11-210ENST00000584340 NUP160Q12769 1436 aa18.23■□□□□ 0.51
PSMD11-210ENST00000584340 CUL7Q14999 1698 aa18.23■□□□□ 0.51
PSMD11-210ENST00000584340 CEP170Q5SW79 1584 aa18.22■□□□□ 0.51
PSMD11-210ENST00000584340 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
PSMD11-210ENST00000584340 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
PSMD11-210ENST00000584340 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
PSMD11-210ENST00000584340 EEA1Q15075 1411 aa18.11■□□□□ 0.49
PSMD11-210ENST00000584340 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
PSMD11-210ENST00000584340 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
PSMD11-210ENST00000584340 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
PSMD11-210ENST00000584340 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms