RNA–Protein interactions for RNA: ENST00000584322.1

BRIP1-206, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 3

Gene BRIP1, Length 716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-206ENST00000584322 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
BRIP1-206ENST00000584322 AEBP2Q6ZN18 517 aaPredicted RBP29.67■■■□□ 2.34
BRIP1-206ENST00000584322 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
BRIP1-206ENST00000584322 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
BRIP1-206ENST00000584322 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
BRIP1-206ENST00000584322 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
BRIP1-206ENST00000584322 FOXD1Q16676 465 aa23.22■■□□□ 1.31
BRIP1-206ENST00000584322 ADRA2BP18089 450 aa22.92■■□□□ 1.26
BRIP1-206ENST00000584322 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
BRIP1-206ENST00000584322 PIAS4Q8N2W9 510 aaPredicted RBP22.1■■□□□ 1.13
BRIP1-206ENST00000584322 KCNA4P22459 653 aa21.92■■□□□ 1.1
BRIP1-206ENST00000584322 PPP4R3CPQ6ZMV5 832 aa21.66■■□□□ 1.06
BRIP1-206ENST00000584322 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
BRIP1-206ENST00000584322 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
BRIP1-206ENST00000584322 MSH5O43196 834 aa21.2■□□□□ 0.98
BRIP1-206ENST00000584322 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
BRIP1-206ENST00000584322 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
BRIP1-206ENST00000584322 SLC4A1APQ9BWU0 796 aaKnown RBP21.05■□□□□ 0.96
BRIP1-206ENST00000584322 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
BRIP1-206ENST00000584322 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
BRIP1-206ENST00000584322 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
BRIP1-206ENST00000584322 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
BRIP1-206ENST00000584322 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
BRIP1-206ENST00000584322 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
BRIP1-206ENST00000584322 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
BRIP1-206ENST00000584322 ZBTB22O15209 634 aa20.14■□□□□ 0.81
BRIP1-206ENST00000584322 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
BRIP1-206ENST00000584322 ABCC9O60706 1549 aa20.07■□□□□ 0.8
BRIP1-206ENST00000584322 HOXD11P31277 338 aaPredicted RBP20.04■□□□□ 0.8
BRIP1-206ENST00000584322 FOXD4L1Q9NU39 408 aa20■□□□□ 0.79
BRIP1-206ENST00000584322 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
BRIP1-206ENST00000584322 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
BRIP1-206ENST00000584322 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
BRIP1-206ENST00000584322 NACADO15069 1562 aa19.77■□□□□ 0.76
BRIP1-206ENST00000584322 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
BRIP1-206ENST00000584322 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
BRIP1-206ENST00000584322 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
BRIP1-206ENST00000584322 MYCNP04198 464 aaPredicted RBP19.39■□□□□ 0.69
BRIP1-206ENST00000584322 ATXN8OSP0DMR3 200 aa19.3■□□□□ 0.68
BRIP1-206ENST00000584322 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
BRIP1-206ENST00000584322 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
BRIP1-206ENST00000584322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
BRIP1-206ENST00000584322 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
BRIP1-206ENST00000584322 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
BRIP1-206ENST00000584322 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
BRIP1-206ENST00000584322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
BRIP1-206ENST00000584322 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
BRIP1-206ENST00000584322 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
BRIP1-206ENST00000584322 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
BRIP1-206ENST00000584322 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
BRIP1-206ENST00000584322 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
BRIP1-206ENST00000584322 FKBP8Q14318 412 aa18.64■□□□□ 0.57
BRIP1-206ENST00000584322 APLP2Q06481 763 aa18.61■□□□□ 0.57
BRIP1-206ENST00000584322 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
BRIP1-206ENST00000584322 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
BRIP1-206ENST00000584322 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
BRIP1-206ENST00000584322 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
BRIP1-206ENST00000584322 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
BRIP1-206ENST00000584322 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
BRIP1-206ENST00000584322 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
BRIP1-206ENST00000584322 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
BRIP1-206ENST00000584322 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
BRIP1-206ENST00000584322 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
BRIP1-206ENST00000584322 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
BRIP1-206ENST00000584322 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
BRIP1-206ENST00000584322 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
BRIP1-206ENST00000584322 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
BRIP1-206ENST00000584322 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
BRIP1-206ENST00000584322 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
BRIP1-206ENST00000584322 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
BRIP1-206ENST00000584322 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
BRIP1-206ENST00000584322 WIZO95785 1651 aa18.09■□□□□ 0.49
BRIP1-206ENST00000584322 CAPN15O75808 1086 aa18.06■□□□□ 0.48
BRIP1-206ENST00000584322 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
BRIP1-206ENST00000584322 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
BRIP1-206ENST00000584322 FBLN2P98095 1184 aa18.03■□□□□ 0.48
BRIP1-206ENST00000584322 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
BRIP1-206ENST00000584322 POLA2Q14181 598 aa18■□□□□ 0.47
BRIP1-206ENST00000584322 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
BRIP1-206ENST00000584322 MKRN4PQ13434 485 aaPredicted RBP17.98■□□□□ 0.47
BRIP1-206ENST00000584322 FBXO3Q9UK99 471 aa17.87■□□□□ 0.45
BRIP1-206ENST00000584322 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
BRIP1-206ENST00000584322 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
BRIP1-206ENST00000584322 PROM2Q8N271 834 aa17.75■□□□□ 0.43
BRIP1-206ENST00000584322 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
BRIP1-206ENST00000584322 ABCB7O75027 752 aa17.72■□□□□ 0.43
BRIP1-206ENST00000584322 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
BRIP1-206ENST00000584322 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
BRIP1-206ENST00000584322 CFTRP13569 1480 aa17.63■□□□□ 0.41
BRIP1-206ENST00000584322 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
BRIP1-206ENST00000584322 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
BRIP1-206ENST00000584322 DSG3P32926 999 aa17.55■□□□□ 0.4
BRIP1-206ENST00000584322 VASPP50552 380 aaPredicted RBP17.54■□□□□ 0.4
BRIP1-206ENST00000584322 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
BRIP1-206ENST00000584322 NESP48681 1621 aa17.47■□□□□ 0.39
BRIP1-206ENST00000584322 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
BRIP1-206ENST00000584322 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
BRIP1-206ENST00000584322 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
BRIP1-206ENST00000584322 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
BRIP1-206ENST00000584322 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms