RNA–Protein interactions for RNA: ENST00000584273.1

LINC01956-202, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 3 BASIC

Gene LINC01956, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-202ENST00000584273 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
LINC01956-202ENST00000584273 CCDC180Q9P1Z9 1646 aa38.13■■■■□ 3.69
LINC01956-202ENST00000584273 ABCC9O60706 1549 aa37.51■■■■□ 3.6
LINC01956-202ENST00000584273 RB1CC1Q8TDY2 1594 aa35.96■■■■□ 3.35
LINC01956-202ENST00000584273 DCAF8L2P0C7V8 631 aa35.9■■■■□ 3.34
LINC01956-202ENST00000584273 NACADO15069 1562 aa35.84■■■■□ 3.33
LINC01956-202ENST00000584273 ZCCHC6Q5VYS8 1495 aaKnown RBP35.64■■■■□ 3.3
LINC01956-202ENST00000584273 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.27
LINC01956-202ENST00000584273 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
LINC01956-202ENST00000584273 UNC13AQ9UPW8 1703 aa35.22■■■■□ 3.23
LINC01956-202ENST00000584273 PABPN1Q86U42 306 aaKnown RBP eCLIP35.02■■■■□ 3.2
LINC01956-202ENST00000584273 SCRIBQ14160 1630 aa34.89■■■■□ 3.18
LINC01956-202ENST00000584273 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
LINC01956-202ENST00000584273 DNAJC5BQ9UF47 199 aa34.49■■■■□ 3.11
LINC01956-202ENST00000584273 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
LINC01956-202ENST00000584273 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
LINC01956-202ENST00000584273 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
LINC01956-202ENST00000584273 CECR2Q9BXF3 1484 aa33.68■■■□□ 2.98
LINC01956-202ENST00000584273 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
LINC01956-202ENST00000584273 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
LINC01956-202ENST00000584273 ATAD2BQ9ULI0 1458 aa33.1■■■□□ 2.89
LINC01956-202ENST00000584273 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
LINC01956-202ENST00000584273 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
LINC01956-202ENST00000584273 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
LINC01956-202ENST00000584273 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
LINC01956-202ENST00000584273 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
LINC01956-202ENST00000584273 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
LINC01956-202ENST00000584273 WIZO95785 1651 aa32.71■■■□□ 2.83
LINC01956-202ENST00000584273 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
LINC01956-202ENST00000584273 NESP48681 1621 aa32.43■■■□□ 2.78
LINC01956-202ENST00000584273 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
LINC01956-202ENST00000584273 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
LINC01956-202ENST00000584273 LAMC3Q9Y6N6 1575 aa32.25■■■□□ 2.75
LINC01956-202ENST00000584273 CADPSQ9ULU8 1353 aa32.09■■■□□ 2.73
LINC01956-202ENST00000584273 KIF21AQ7Z4S6 1674 aa32.07■■■□□ 2.72
LINC01956-202ENST00000584273 PDS5BQ9NTI5 1447 aa32.01■■■□□ 2.72
LINC01956-202ENST00000584273 CUX2O14529 1486 aa31.96■■■□□ 2.71
LINC01956-202ENST00000584273 THOC2Q8NI27 1593 aaKnown RBP31.95■■■□□ 2.71
LINC01956-202ENST00000584273 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
LINC01956-202ENST00000584273 CFTRP13569 1480 aa31.89■■■□□ 2.7
LINC01956-202ENST00000584273 FANCD2Q9BXW9 1451 aa31.79■■■□□ 2.68
LINC01956-202ENST00000584273 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
LINC01956-202ENST00000584273 MRC2Q9UBG0 1479 aa31.75■■■□□ 2.67
LINC01956-202ENST00000584273 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
LINC01956-202ENST00000584273 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
LINC01956-202ENST00000584273 WDR62O43379 1518 aa31.64■■■□□ 2.66
LINC01956-202ENST00000584273 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
LINC01956-202ENST00000584273 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
LINC01956-202ENST00000584273 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
LINC01956-202ENST00000584273 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
LINC01956-202ENST00000584273 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
LINC01956-202ENST00000584273 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
LINC01956-202ENST00000584273 ZNF608Q9ULD9 1512 aaPredicted RBP31.01■■■□□ 2.55
LINC01956-202ENST00000584273 CUX1P39880 1505 aa31■■■□□ 2.55
LINC01956-202ENST00000584273 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
LINC01956-202ENST00000584273 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
LINC01956-202ENST00000584273 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
LINC01956-202ENST00000584273 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
LINC01956-202ENST00000584273 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
LINC01956-202ENST00000584273 SOGA1O94964 1423 aa30.83■■■□□ 2.53
LINC01956-202ENST00000584273 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.52
LINC01956-202ENST00000584273 SYNJ1O43426 1573 aa30.72■■■□□ 2.51
LINC01956-202ENST00000584273 TDRD9Q8NDG6 1382 aaKnown RBP30.72■■■□□ 2.51
LINC01956-202ENST00000584273 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
LINC01956-202ENST00000584273 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
LINC01956-202ENST00000584273 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
LINC01956-202ENST00000584273 TOP2BQ02880 1626 aa30.68■■■□□ 2.5
LINC01956-202ENST00000584273 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
LINC01956-202ENST00000584273 CHD1O14646 1710 aa30.56■■■□□ 2.48
LINC01956-202ENST00000584273 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
LINC01956-202ENST00000584273 SNAPC4Q5SXM2 1469 aa30.54■■■□□ 2.48
LINC01956-202ENST00000584273 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
LINC01956-202ENST00000584273 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.47
LINC01956-202ENST00000584273 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
LINC01956-202ENST00000584273 GAPVD1Q14C86 1478 aa30.49■■■□□ 2.47
LINC01956-202ENST00000584273 FBLN2P98095 1184 aa30.48■■■□□ 2.47
LINC01956-202ENST00000584273 MAGI1Q96QZ7 1491 aaPredicted RBP30.42■■■□□ 2.46
LINC01956-202ENST00000584273 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
LINC01956-202ENST00000584273 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
LINC01956-202ENST00000584273 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
LINC01956-202ENST00000584273 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
LINC01956-202ENST00000584273 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
LINC01956-202ENST00000584273 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
LINC01956-202ENST00000584273 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
LINC01956-202ENST00000584273 ARHGEF11O15085 1522 aa30.18■■■□□ 2.42
LINC01956-202ENST00000584273 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
LINC01956-202ENST00000584273 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
LINC01956-202ENST00000584273 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
LINC01956-202ENST00000584273 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
LINC01956-202ENST00000584273 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
LINC01956-202ENST00000584273 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
LINC01956-202ENST00000584273 NUP160Q12769 1436 aa29.96■■■□□ 2.39
LINC01956-202ENST00000584273 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
LINC01956-202ENST00000584273 IGF1RP08069 1367 aa29.93■■■□□ 2.38
LINC01956-202ENST00000584273 CUL7Q14999 1698 aa29.93■■■□□ 2.38
LINC01956-202ENST00000584273 CYB5RLQ6IPT4 315 aa29.89■■■□□ 2.38
LINC01956-202ENST00000584273 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
LINC01956-202ENST00000584273 ERCC6L2Q5T890 1561 aa29.8■■■□□ 2.36
LINC01956-202ENST00000584273 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
LINC01956-202ENST00000584273 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms