RNA–Protein interactions for RNA: ENST00000584205.5

ATPAF2-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-212ENST00000584205 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
ATPAF2-212ENST00000584205 CCDC180Q9P1Z9 1646 aa43.27■■■■■ 4.52
ATPAF2-212ENST00000584205 ABCC9O60706 1549 aa42.72■■■■■ 4.43
ATPAF2-212ENST00000584205 RB1CC1Q8TDY2 1594 aa40.9■■■■■ 4.14
ATPAF2-212ENST00000584205 NACADO15069 1562 aa40.78■■■■■ 4.12
ATPAF2-212ENST00000584205 DCAF8L2P0C7V8 631 aa40.68■■■■■ 4.1
ATPAF2-212ENST00000584205 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
ATPAF2-212ENST00000584205 ZCCHC6Q5VYS8 1495 aaKnown RBP40.4■■■■■ 4.06
ATPAF2-212ENST00000584205 DCAF1Q9Y4B6 1507 aa40.15■■■■■ 4.02
ATPAF2-212ENST00000584205 UNC13AQ9UPW8 1703 aa39.99■■■■□ 3.99
ATPAF2-212ENST00000584205 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
ATPAF2-212ENST00000584205 BICRAQ9NZM4 1560 aa39.75■■■■□ 3.95
ATPAF2-212ENST00000584205 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
ATPAF2-212ENST00000584205 SCRIBQ14160 1630 aa39.51■■■■□ 3.92
ATPAF2-212ENST00000584205 SHROOM4Q9ULL8 1493 aa39.22■■■■□ 3.87
ATPAF2-212ENST00000584205 EIF4G1Q04637 1599 aaKnown RBP38.69■■■■□ 3.78
ATPAF2-212ENST00000584205 CC2D2AQ9P2K1 1620 aa38.61■■■■□ 3.77
ATPAF2-212ENST00000584205 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
ATPAF2-212ENST00000584205 SMARCA4P51532 1647 aa37.75■■■■□ 3.63
ATPAF2-212ENST00000584205 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
ATPAF2-212ENST00000584205 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
ATPAF2-212ENST00000584205 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.62
ATPAF2-212ENST00000584205 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
ATPAF2-212ENST00000584205 MROH2BQ7Z745 1585 aa37.46■■■■□ 3.59
ATPAF2-212ENST00000584205 HMGXB3Q12766 1538 aa37.43■■■■□ 3.58
ATPAF2-212ENST00000584205 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.58
ATPAF2-212ENST00000584205 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
ATPAF2-212ENST00000584205 WIZO95785 1651 aa37.01■■■■□ 3.52
ATPAF2-212ENST00000584205 NESP48681 1621 aa36.9■■■■□ 3.5
ATPAF2-212ENST00000584205 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
ATPAF2-212ENST00000584205 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
ATPAF2-212ENST00000584205 LAMC3Q9Y6N6 1575 aa36.69■■■■□ 3.46
ATPAF2-212ENST00000584205 TOP2AP11388 1531 aaKnown RBP36.59■■■■□ 3.45
ATPAF2-212ENST00000584205 CUX2O14529 1486 aa36.55■■■■□ 3.44
ATPAF2-212ENST00000584205 CADPSQ9ULU8 1353 aa36.54■■■■□ 3.44
ATPAF2-212ENST00000584205 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
ATPAF2-212ENST00000584205 KIF21AQ7Z4S6 1674 aa36.4■■■■□ 3.42
ATPAF2-212ENST00000584205 THOC2Q8NI27 1593 aaKnown RBP36.39■■■■□ 3.42
ATPAF2-212ENST00000584205 CFTRP13569 1480 aa36.27■■■■□ 3.4
ATPAF2-212ENST00000584205 CCDC88BA6NC98 1476 aa36.18■■■■□ 3.38
ATPAF2-212ENST00000584205 FANCD2Q9BXW9 1451 aa36.13■■■■□ 3.37
ATPAF2-212ENST00000584205 MRC2Q9UBG0 1479 aa36.12■■■■□ 3.37
ATPAF2-212ENST00000584205 CEP164Q9UPV0 1460 aa36.1■■■■□ 3.37
ATPAF2-212ENST00000584205 WDR62O43379 1518 aa36.03■■■■□ 3.36
ATPAF2-212ENST00000584205 PRDM2Q13029 1718 aa35.89■■■■□ 3.34
ATPAF2-212ENST00000584205 DNAJC5Q9H3Z4 198 aa35.84■■■■□ 3.33
ATPAF2-212ENST00000584205 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
ATPAF2-212ENST00000584205 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
ATPAF2-212ENST00000584205 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
ATPAF2-212ENST00000584205 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
ATPAF2-212ENST00000584205 DNMBPQ6XZF7 1577 aa35.43■■■■□ 3.26
ATPAF2-212ENST00000584205 IFT140Q96RY7 1462 aa35.35■■■■□ 3.25
ATPAF2-212ENST00000584205 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
ATPAF2-212ENST00000584205 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
ATPAF2-212ENST00000584205 TARBP1Q13395 1621 aaKnown RBP35.16■■■■□ 3.22
ATPAF2-212ENST00000584205 CUX1P39880 1505 aa35.16■■■■□ 3.22
ATPAF2-212ENST00000584205 EIF4G3O43432 1585 aaKnown RBP35.08■■■■□ 3.21
ATPAF2-212ENST00000584205 RAD54L2Q9Y4B4 1467 aa35.08■■■■□ 3.21
ATPAF2-212ENST00000584205 FGD5Q6ZNL6 1462 aa35.07■■■■□ 3.2
ATPAF2-212ENST00000584205 SOGA1O94964 1423 aa35.04■■■■□ 3.2
ATPAF2-212ENST00000584205 AQRO60306 1485 aaKnown RBP eCLIP35.03■■■■□ 3.2
ATPAF2-212ENST00000584205 OSCARQ8IYS5 282 aa34.96■■■■□ 3.19
ATPAF2-212ENST00000584205 TDRD9Q8NDG6 1382 aaKnown RBP34.9■■■■□ 3.18
ATPAF2-212ENST00000584205 WDR97A6NE52 1622 aa34.81■■■■□ 3.16
ATPAF2-212ENST00000584205 WRNQ14191 1432 aaPredicted RBP eCLIP34.78■■■■□ 3.16
ATPAF2-212ENST00000584205 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
ATPAF2-212ENST00000584205 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
ATPAF2-212ENST00000584205 BIVM-ERCC5R4GMW8 1640 aa34.72■■■■□ 3.15
ATPAF2-212ENST00000584205 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
ATPAF2-212ENST00000584205 SNAPC4Q5SXM2 1469 aa34.69■■■■□ 3.14
ATPAF2-212ENST00000584205 CHD1O14646 1710 aa34.69■■■■□ 3.14
ATPAF2-212ENST00000584205 GRIN2BQ13224 1484 aa34.66■■■■□ 3.14
ATPAF2-212ENST00000584205 FBLN2P98095 1184 aa34.62■■■■□ 3.13
ATPAF2-212ENST00000584205 GAPVD1Q14C86 1478 aa34.62■■■■□ 3.13
ATPAF2-212ENST00000584205 MAGI1Q96QZ7 1491 aaPredicted RBP34.6■■■■□ 3.13
ATPAF2-212ENST00000584205 ABCA5Q8WWZ7 1642 aa34.6■■■■□ 3.13
ATPAF2-212ENST00000584205 PBRM1Q86U86 1689 aa34.55■■■■□ 3.12
ATPAF2-212ENST00000584205 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
ATPAF2-212ENST00000584205 SYNJ2O15056 1496 aa34.47■■■■□ 3.11
ATPAF2-212ENST00000584205 CHMP7Q8WUX9 453 aaPredicted RBP34.47■■■■□ 3.11
ATPAF2-212ENST00000584205 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
ATPAF2-212ENST00000584205 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
ATPAF2-212ENST00000584205 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
ATPAF2-212ENST00000584205 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
ATPAF2-212ENST00000584205 CLASP1Q7Z460 1538 aa34.35■■■■□ 3.09
ATPAF2-212ENST00000584205 ADAMTS12P58397 1594 aa34.29■■■■□ 3.08
ATPAF2-212ENST00000584205 ERICH3Q5RHP9 1530 aa34.26■■■■□ 3.08
ATPAF2-212ENST00000584205 GRIN2AQ12879 1464 aa34.22■■■■□ 3.07
ATPAF2-212ENST00000584205 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
ATPAF2-212ENST00000584205 ARAP1Q96P48 1450 aa34.16■■■■□ 3.06
ATPAF2-212ENST00000584205 CYB5RLQ6IPT4 315 aa34.12■■■■□ 3.05
ATPAF2-212ENST00000584205 NUP160Q12769 1436 aa34.1■■■■□ 3.05
ATPAF2-212ENST00000584205 CEP170Q5SW79 1584 aa34.1■■■■□ 3.05
ATPAF2-212ENST00000584205 KIF27Q86VH2 1401 aa34.05■■■■□ 3.04
ATPAF2-212ENST00000584205 IGF1RP08069 1367 aa34■■■■□ 3.03
ATPAF2-212ENST00000584205 ERCC6L2Q5T890 1561 aa33.88■■■■□ 3.01
ATPAF2-212ENST00000584205 SHROOM2Q13796 1616 aa33.87■■■■□ 3.01
ATPAF2-212ENST00000584205 CUL7Q14999 1698 aa33.87■■■■□ 3.01
ATPAF2-212ENST00000584205 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
ATPAF2-212ENST00000584205 CARMIL1Q5VZK9 1371 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms