RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
CDK5RAP3-233ENST00000584186 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
CDK5RAP3-233ENST00000584186 ABCC9O60706 1549 aa29.74■■■□□ 2.35
CDK5RAP3-233ENST00000584186 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
CDK5RAP3-233ENST00000584186 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
CDK5RAP3-233ENST00000584186 NACADO15069 1562 aa28.23■■■□□ 2.11
CDK5RAP3-233ENST00000584186 MYO15BQ96JP2 1530 aa27.89■■■□□ 2.06
CDK5RAP3-233ENST00000584186 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
CDK5RAP3-233ENST00000584186 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDK5RAP3-233ENST00000584186 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.02
CDK5RAP3-233ENST00000584186 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
CDK5RAP3-233ENST00000584186 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
CDK5RAP3-233ENST00000584186 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
CDK5RAP3-233ENST00000584186 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
CDK5RAP3-233ENST00000584186 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
CDK5RAP3-233ENST00000584186 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
CDK5RAP3-233ENST00000584186 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.89
CDK5RAP3-233ENST00000584186 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
CDK5RAP3-233ENST00000584186 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
CDK5RAP3-233ENST00000584186 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
CDK5RAP3-233ENST00000584186 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
CDK5RAP3-233ENST00000584186 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
CDK5RAP3-233ENST00000584186 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
CDK5RAP3-233ENST00000584186 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
CDK5RAP3-233ENST00000584186 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
CDK5RAP3-233ENST00000584186 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
CDK5RAP3-233ENST00000584186 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
CDK5RAP3-233ENST00000584186 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
CDK5RAP3-233ENST00000584186 NESP48681 1621 aa25.62■■□□□ 1.69
CDK5RAP3-233ENST00000584186 WIZO95785 1651 aa25.57■■□□□ 1.68
CDK5RAP3-233ENST00000584186 CUX2O14529 1486 aa25.44■■□□□ 1.66
CDK5RAP3-233ENST00000584186 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
CDK5RAP3-233ENST00000584186 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
CDK5RAP3-233ENST00000584186 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
CDK5RAP3-233ENST00000584186 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
CDK5RAP3-233ENST00000584186 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
CDK5RAP3-233ENST00000584186 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
CDK5RAP3-233ENST00000584186 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
CDK5RAP3-233ENST00000584186 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
CDK5RAP3-233ENST00000584186 CFTRP13569 1480 aa25.07■■□□□ 1.6
CDK5RAP3-233ENST00000584186 MRC2Q9UBG0 1479 aa25.07■■□□□ 1.6
CDK5RAP3-233ENST00000584186 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
CDK5RAP3-233ENST00000584186 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
CDK5RAP3-233ENST00000584186 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
CDK5RAP3-233ENST00000584186 WDR62O43379 1518 aa24.96■■□□□ 1.59
CDK5RAP3-233ENST00000584186 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
CDK5RAP3-233ENST00000584186 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
CDK5RAP3-233ENST00000584186 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
CDK5RAP3-233ENST00000584186 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
CDK5RAP3-233ENST00000584186 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
CDK5RAP3-233ENST00000584186 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
CDK5RAP3-233ENST00000584186 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
CDK5RAP3-233ENST00000584186 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
CDK5RAP3-233ENST00000584186 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
CDK5RAP3-233ENST00000584186 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
CDK5RAP3-233ENST00000584186 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
CDK5RAP3-233ENST00000584186 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
CDK5RAP3-233ENST00000584186 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.483e-7■■■■□ 19.4
CDK5RAP3-233ENST00000584186 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
CDK5RAP3-233ENST00000584186 SOGA1O94964 1423 aa24.28■■□□□ 1.48
CDK5RAP3-233ENST00000584186 CUX1P39880 1505 aa24.28■■□□□ 1.48
CDK5RAP3-233ENST00000584186 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
CDK5RAP3-233ENST00000584186 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
CDK5RAP3-233ENST00000584186 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
CDK5RAP3-233ENST00000584186 FBLN2P98095 1184 aa24.17■■□□□ 1.46
CDK5RAP3-233ENST00000584186 CHD1O14646 1710 aa24.08■■□□□ 1.45
CDK5RAP3-233ENST00000584186 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
CDK5RAP3-233ENST00000584186 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
CDK5RAP3-233ENST00000584186 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
CDK5RAP3-233ENST00000584186 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
CDK5RAP3-233ENST00000584186 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
CDK5RAP3-233ENST00000584186 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
CDK5RAP3-233ENST00000584186 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
CDK5RAP3-233ENST00000584186 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
CDK5RAP3-233ENST00000584186 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
CDK5RAP3-233ENST00000584186 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
CDK5RAP3-233ENST00000584186 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
CDK5RAP3-233ENST00000584186 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
CDK5RAP3-233ENST00000584186 ARHGEF11O15085 1522 aa23.96■■□□□ 1.43
CDK5RAP3-233ENST00000584186 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
CDK5RAP3-233ENST00000584186 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
CDK5RAP3-233ENST00000584186 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
CDK5RAP3-233ENST00000584186 ABCA5Q8WWZ7 1642 aa23.9■■□□□ 1.42
CDK5RAP3-233ENST00000584186 SYNJ2O15056 1496 aa23.89■■□□□ 1.42
CDK5RAP3-233ENST00000584186 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
CDK5RAP3-233ENST00000584186 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
CDK5RAP3-233ENST00000584186 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
CDK5RAP3-233ENST00000584186 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
CDK5RAP3-233ENST00000584186 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
CDK5RAP3-233ENST00000584186 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
CDK5RAP3-233ENST00000584186 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
CDK5RAP3-233ENST00000584186 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
CDK5RAP3-233ENST00000584186 NUP160Q12769 1436 aa23.59■■□□□ 1.37
CDK5RAP3-233ENST00000584186 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
CDK5RAP3-233ENST00000584186 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
CDK5RAP3-233ENST00000584186 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
CDK5RAP3-233ENST00000584186 IGF1RP08069 1367 aa23.48■■□□□ 1.35
CDK5RAP3-233ENST00000584186 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
CDK5RAP3-233ENST00000584186 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
CDK5RAP3-233ENST00000584186 CUL7Q14999 1698 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms