RNA–Protein interactions for RNA: ENST00000584056.1

RPL23-209, Transcript of ribosomal protein L23, humanhuman

TSL 2

Gene RPL23, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23-209ENST00000584056 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
RPL23-209ENST00000584056 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
RPL23-209ENST00000584056 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
RPL23-209ENST00000584056 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
RPL23-209ENST00000584056 ABCC9O60706 1549 aa19.91■□□□□ 0.78
RPL23-209ENST00000584056 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
RPL23-209ENST00000584056 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
RPL23-209ENST00000584056 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
RPL23-209ENST00000584056 NACADO15069 1562 aa19.68■□□□□ 0.74
RPL23-209ENST00000584056 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
RPL23-209ENST00000584056 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
RPL23-209ENST00000584056 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
RPL23-209ENST00000584056 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
RPL23-209ENST00000584056 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
RPL23-209ENST00000584056 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
RPL23-209ENST00000584056 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
RPL23-209ENST00000584056 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
RPL23-209ENST00000584056 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
RPL23-209ENST00000584056 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
RPL23-209ENST00000584056 WIZO95785 1651 aa18.73■□□□□ 0.59
RPL23-209ENST00000584056 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
RPL23-209ENST00000584056 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
RPL23-209ENST00000584056 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
RPL23-209ENST00000584056 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
RPL23-209ENST00000584056 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
RPL23-209ENST00000584056 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
RPL23-209ENST00000584056 AEBP2Q6ZN18 517 aaPredicted RBP18.34■□□□□ 0.53
RPL23-209ENST00000584056 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.52
RPL23-209ENST00000584056 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
RPL23-209ENST00000584056 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
RPL23-209ENST00000584056 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
RPL23-209ENST00000584056 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
RPL23-209ENST00000584056 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
RPL23-209ENST00000584056 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
RPL23-209ENST00000584056 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
RPL23-209ENST00000584056 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
RPL23-209ENST00000584056 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
RPL23-209ENST00000584056 CFTRP13569 1480 aa17.76■□□□□ 0.43
RPL23-209ENST00000584056 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
RPL23-209ENST00000584056 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
RPL23-209ENST00000584056 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
RPL23-209ENST00000584056 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
RPL23-209ENST00000584056 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
RPL23-209ENST00000584056 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
RPL23-209ENST00000584056 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
RPL23-209ENST00000584056 CUX1P39880 1505 aa17.61■□□□□ 0.41
RPL23-209ENST00000584056 SOGA1O94964 1423 aa17.59■□□□□ 0.41
RPL23-209ENST00000584056 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
RPL23-209ENST00000584056 EEA1Q15075 1411 aa17.55■□□□□ 0.4
RPL23-209ENST00000584056 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
RPL23-209ENST00000584056 NESP48681 1621 aa17.54■□□□□ 0.4
RPL23-209ENST00000584056 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
RPL23-209ENST00000584056 KIF21BO75037 1637 aa17.43■□□□□ 0.38
RPL23-209ENST00000584056 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
RPL23-209ENST00000584056 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
RPL23-209ENST00000584056 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
RPL23-209ENST00000584056 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
RPL23-209ENST00000584056 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
RPL23-209ENST00000584056 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
RPL23-209ENST00000584056 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
RPL23-209ENST00000584056 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
RPL23-209ENST00000584056 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
RPL23-209ENST00000584056 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
RPL23-209ENST00000584056 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
RPL23-209ENST00000584056 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
RPL23-209ENST00000584056 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.35
RPL23-209ENST00000584056 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
RPL23-209ENST00000584056 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
RPL23-209ENST00000584056 CUX2O14529 1486 aa17.25■□□□□ 0.35
RPL23-209ENST00000584056 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
RPL23-209ENST00000584056 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
RPL23-209ENST00000584056 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
RPL23-209ENST00000584056 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
RPL23-209ENST00000584056 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
RPL23-209ENST00000584056 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
RPL23-209ENST00000584056 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
RPL23-209ENST00000584056 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
RPL23-209ENST00000584056 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
RPL23-209ENST00000584056 WDR62O43379 1518 aa17.11■□□□□ 0.33
RPL23-209ENST00000584056 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
RPL23-209ENST00000584056 CUL7Q14999 1698 aa17.1■□□□□ 0.33
RPL23-209ENST00000584056 IGF1RP08069 1367 aa17.09■□□□□ 0.33
RPL23-209ENST00000584056 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
RPL23-209ENST00000584056 CLIP1P30622 1438 aa17.04■□□□□ 0.32
RPL23-209ENST00000584056 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
RPL23-209ENST00000584056 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
RPL23-209ENST00000584056 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
RPL23-209ENST00000584056 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
RPL23-209ENST00000584056 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
RPL23-209ENST00000584056 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
RPL23-209ENST00000584056 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
RPL23-209ENST00000584056 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
RPL23-209ENST00000584056 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
RPL23-209ENST00000584056 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
RPL23-209ENST00000584056 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
RPL23-209ENST00000584056 ARHGAP35Q9NRY4 1499 aa16.89■□□□□ 0.29
RPL23-209ENST00000584056 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
RPL23-209ENST00000584056 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
RPL23-209ENST00000584056 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
RPL23-209ENST00000584056 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.291e-11■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms