RNA–Protein interactions for RNA: ENST00000583943.1

MIR4642-201, Transcript of microRNA 4642, humanhuman

BASIC

Gene MIR4642, Length 82 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4642-201ENST00000583943 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
MIR4642-201ENST00000583943 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
MIR4642-201ENST00000583943 ABCC9O60706 1549 aa16.87■□□□□ 0.29
MIR4642-201ENST00000583943 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
MIR4642-201ENST00000583943 NACADO15069 1562 aa16.18■□□□□ 0.18
MIR4642-201ENST00000583943 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
MIR4642-201ENST00000583943 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
MIR4642-201ENST00000583943 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
MIR4642-201ENST00000583943 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
MIR4642-201ENST00000583943 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
MIR4642-201ENST00000583943 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
MIR4642-201ENST00000583943 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
MIR4642-201ENST00000583943 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
MIR4642-201ENST00000583943 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
MIR4642-201ENST00000583943 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
MIR4642-201ENST00000583943 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
MIR4642-201ENST00000583943 CC2D2AQ9P2K1 1620 aa15.28■□□□□ 0.04
MIR4642-201ENST00000583943 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
MIR4642-201ENST00000583943 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
MIR4642-201ENST00000583943 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
MIR4642-201ENST00000583943 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
MIR4642-201ENST00000583943 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
MIR4642-201ENST00000583943 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
MIR4642-201ENST00000583943 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
MIR4642-201ENST00000583943 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
MIR4642-201ENST00000583943 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
MIR4642-201ENST00000583943 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
MIR4642-201ENST00000583943 ERCC6Q03468 1493 aa14.59□□□□□ -0.07
MIR4642-201ENST00000583943 CUX2O14529 1486 aa14.56□□□□□ -0.08
MIR4642-201ENST00000583943 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
MIR4642-201ENST00000583943 WIZO95785 1651 aa14.54□□□□□ -0.08
MIR4642-201ENST00000583943 NESP48681 1621 aa14.52□□□□□ -0.08
MIR4642-201ENST00000583943 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
MIR4642-201ENST00000583943 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
MIR4642-201ENST00000583943 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
MIR4642-201ENST00000583943 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
MIR4642-201ENST00000583943 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
MIR4642-201ENST00000583943 KIF21AQ7Z4S6 1674 aa14.36□□□□□ -0.11
MIR4642-201ENST00000583943 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
MIR4642-201ENST00000583943 CFTRP13569 1480 aa14.33□□□□□ -0.12
MIR4642-201ENST00000583943 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
MIR4642-201ENST00000583943 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
MIR4642-201ENST00000583943 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
MIR4642-201ENST00000583943 WDR62O43379 1518 aa14.25□□□□□ -0.13
MIR4642-201ENST00000583943 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
MIR4642-201ENST00000583943 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
MIR4642-201ENST00000583943 URB2Q14146 1524 aaKnown RBP14.11□□□□□ -0.15
MIR4642-201ENST00000583943 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
MIR4642-201ENST00000583943 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
MIR4642-201ENST00000583943 IFT140Q96RY7 1462 aa14□□□□□ -0.17
MIR4642-201ENST00000583943 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
MIR4642-201ENST00000583943 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
MIR4642-201ENST00000583943 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
MIR4642-201ENST00000583943 ZNF608Q9ULD9 1512 aaPredicted RBP13.89□□□□□ -0.19
MIR4642-201ENST00000583943 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
MIR4642-201ENST00000583943 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
MIR4642-201ENST00000583943 SOGA1O94964 1423 aa13.86□□□□□ -0.19
MIR4642-201ENST00000583943 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
MIR4642-201ENST00000583943 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
MIR4642-201ENST00000583943 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.2
MIR4642-201ENST00000583943 CUX1P39880 1505 aa13.81□□□□□ -0.2
MIR4642-201ENST00000583943 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
MIR4642-201ENST00000583943 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
MIR4642-201ENST00000583943 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
MIR4642-201ENST00000583943 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
MIR4642-201ENST00000583943 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
MIR4642-201ENST00000583943 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
MIR4642-201ENST00000583943 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
MIR4642-201ENST00000583943 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
MIR4642-201ENST00000583943 FBLN2P98095 1184 aa13.7□□□□□ -0.22
MIR4642-201ENST00000583943 CHD1O14646 1710 aa13.7□□□□□ -0.22
MIR4642-201ENST00000583943 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
MIR4642-201ENST00000583943 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
MIR4642-201ENST00000583943 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
MIR4642-201ENST00000583943 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
MIR4642-201ENST00000583943 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
MIR4642-201ENST00000583943 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
MIR4642-201ENST00000583943 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
MIR4642-201ENST00000583943 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
MIR4642-201ENST00000583943 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
MIR4642-201ENST00000583943 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
MIR4642-201ENST00000583943 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
MIR4642-201ENST00000583943 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
MIR4642-201ENST00000583943 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
MIR4642-201ENST00000583943 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
MIR4642-201ENST00000583943 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
MIR4642-201ENST00000583943 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
MIR4642-201ENST00000583943 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
MIR4642-201ENST00000583943 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
MIR4642-201ENST00000583943 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
MIR4642-201ENST00000583943 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
MIR4642-201ENST00000583943 NUP160Q12769 1436 aa13.47□□□□□ -0.25
MIR4642-201ENST00000583943 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
MIR4642-201ENST00000583943 IGF1RP08069 1367 aa13.42□□□□□ -0.26
MIR4642-201ENST00000583943 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
MIR4642-201ENST00000583943 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
MIR4642-201ENST00000583943 JPH4Q96JJ6 628 aa13.38□□□□□ -0.27
MIR4642-201ENST00000583943 CUL7Q14999 1698 aa13.37□□□□□ -0.27
MIR4642-201ENST00000583943 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
MIR4642-201ENST00000583943 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms