RNA–Protein interactions for RNA: ENST00000583929.1

TMEM11-204, Transcript of transmembrane protein 11, humanhuman

TSL 3

Gene TMEM11, Length 827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM11-204ENST00000583929 NISCHQ9Y2I1 1504 aa36.45■■■■□ 3.43
TMEM11-204ENST00000583929 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
TMEM11-204ENST00000583929 ABCC9O60706 1549 aa32.68■■■□□ 2.82
TMEM11-204ENST00000583929 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
TMEM11-204ENST00000583929 NACADO15069 1562 aa30.96■■■□□ 2.55
TMEM11-204ENST00000583929 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
TMEM11-204ENST00000583929 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
TMEM11-204ENST00000583929 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
TMEM11-204ENST00000583929 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
TMEM11-204ENST00000583929 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
TMEM11-204ENST00000583929 ZCCHC6Q5VYS8 1495 aaKnown RBP30.21■■■□□ 2.43
TMEM11-204ENST00000583929 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
TMEM11-204ENST00000583929 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
TMEM11-204ENST00000583929 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
TMEM11-204ENST00000583929 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
TMEM11-204ENST00000583929 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
TMEM11-204ENST00000583929 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
TMEM11-204ENST00000583929 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
TMEM11-204ENST00000583929 DNAJC5Q9H3Z4 198 aa28.98■■■□□ 2.23
TMEM11-204ENST00000583929 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
TMEM11-204ENST00000583929 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
TMEM11-204ENST00000583929 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
TMEM11-204ENST00000583929 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
TMEM11-204ENST00000583929 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
TMEM11-204ENST00000583929 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
TMEM11-204ENST00000583929 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
TMEM11-204ENST00000583929 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
TMEM11-204ENST00000583929 CUX2O14529 1486 aa28.23■■■□□ 2.11
TMEM11-204ENST00000583929 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
TMEM11-204ENST00000583929 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
TMEM11-204ENST00000583929 NESP48681 1621 aa28.02■■■□□ 2.08
TMEM11-204ENST00000583929 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
TMEM11-204ENST00000583929 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
TMEM11-204ENST00000583929 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
TMEM11-204ENST00000583929 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
TMEM11-204ENST00000583929 WIZO95785 1651 aa27.68■■■□□ 2.02
TMEM11-204ENST00000583929 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
TMEM11-204ENST00000583929 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
TMEM11-204ENST00000583929 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
TMEM11-204ENST00000583929 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
TMEM11-204ENST00000583929 WDR62O43379 1518 aa27.42■■□□□ 1.98
TMEM11-204ENST00000583929 TOP2AP11388 1531 aaKnown RBP27.42■■□□□ 1.98
TMEM11-204ENST00000583929 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
TMEM11-204ENST00000583929 CFTRP13569 1480 aa27.38■■□□□ 1.97
TMEM11-204ENST00000583929 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
TMEM11-204ENST00000583929 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
TMEM11-204ENST00000583929 PRDM2Q13029 1718 aa27.05■■□□□ 1.92
TMEM11-204ENST00000583929 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
TMEM11-204ENST00000583929 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
TMEM11-204ENST00000583929 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
TMEM11-204ENST00000583929 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
TMEM11-204ENST00000583929 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
TMEM11-204ENST00000583929 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TMEM11-204ENST00000583929 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
TMEM11-204ENST00000583929 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.86
TMEM11-204ENST00000583929 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
TMEM11-204ENST00000583929 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
TMEM11-204ENST00000583929 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
TMEM11-204ENST00000583929 SOGA1O94964 1423 aa26.51■■□□□ 1.83
TMEM11-204ENST00000583929 FBLN2P98095 1184 aa26.5■■□□□ 1.83
TMEM11-204ENST00000583929 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
TMEM11-204ENST00000583929 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
TMEM11-204ENST00000583929 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
TMEM11-204ENST00000583929 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
TMEM11-204ENST00000583929 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
TMEM11-204ENST00000583929 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
TMEM11-204ENST00000583929 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
TMEM11-204ENST00000583929 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
TMEM11-204ENST00000583929 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
TMEM11-204ENST00000583929 CHD1O14646 1710 aa26.39■■□□□ 1.82
TMEM11-204ENST00000583929 CUX1P39880 1505 aa26.36■■□□□ 1.81
TMEM11-204ENST00000583929 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
TMEM11-204ENST00000583929 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
TMEM11-204ENST00000583929 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
TMEM11-204ENST00000583929 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
TMEM11-204ENST00000583929 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
TMEM11-204ENST00000583929 SYNJ1O43426 1573 aa26.2■■□□□ 1.79
TMEM11-204ENST00000583929 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
TMEM11-204ENST00000583929 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
TMEM11-204ENST00000583929 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
TMEM11-204ENST00000583929 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.77
TMEM11-204ENST00000583929 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
TMEM11-204ENST00000583929 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
TMEM11-204ENST00000583929 TRHP20396 242 aaPredicted RBP26.09■■□□□ 1.77
TMEM11-204ENST00000583929 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
TMEM11-204ENST00000583929 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
TMEM11-204ENST00000583929 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
TMEM11-204ENST00000583929 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
TMEM11-204ENST00000583929 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
TMEM11-204ENST00000583929 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
TMEM11-204ENST00000583929 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
TMEM11-204ENST00000583929 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
TMEM11-204ENST00000583929 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
TMEM11-204ENST00000583929 NUP160Q12769 1436 aa25.81■■□□□ 1.72
TMEM11-204ENST00000583929 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
TMEM11-204ENST00000583929 SHROOM2Q13796 1616 aa25.65■■□□□ 1.7
TMEM11-204ENST00000583929 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
TMEM11-204ENST00000583929 JPH4Q96JJ6 628 aa25.6■■□□□ 1.69
TMEM11-204ENST00000583929 PRG4Q92954 1404 aaPredicted RBP25.6■■□□□ 1.69
TMEM11-204ENST00000583929 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms