RNA–Protein interactions for RNA: ENST00000583650.2

RN7SL498P-201, Transcript of RNA, 7SL, cytoplasmic 498, pseudogene, humanhuman

BASIC

Gene RN7SL498P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL498P-201ENST00000583650 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
RN7SL498P-201ENST00000583650 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
RN7SL498P-201ENST00000583650 ABCC9O60706 1549 aa22.66■■□□□ 1.22
RN7SL498P-201ENST00000583650 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
RN7SL498P-201ENST00000583650 NACADO15069 1562 aa21.68■■□□□ 1.06
RN7SL498P-201ENST00000583650 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
RN7SL498P-201ENST00000583650 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
RN7SL498P-201ENST00000583650 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
RN7SL498P-201ENST00000583650 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
RN7SL498P-201ENST00000583650 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
RN7SL498P-201ENST00000583650 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
RN7SL498P-201ENST00000583650 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
RN7SL498P-201ENST00000583650 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
RN7SL498P-201ENST00000583650 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
RN7SL498P-201ENST00000583650 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
RN7SL498P-201ENST00000583650 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
RN7SL498P-201ENST00000583650 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
RN7SL498P-201ENST00000583650 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
RN7SL498P-201ENST00000583650 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
RN7SL498P-201ENST00000583650 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
RN7SL498P-201ENST00000583650 NCAPD3P42695 1498 aa20■□□□□ 0.79
RN7SL498P-201ENST00000583650 ATAD2BQ9ULI0 1458 aa20■□□□□ 0.79
RN7SL498P-201ENST00000583650 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
RN7SL498P-201ENST00000583650 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
RN7SL498P-201ENST00000583650 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
RN7SL498P-201ENST00000583650 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
RN7SL498P-201ENST00000583650 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
RN7SL498P-201ENST00000583650 WIZO95785 1651 aa19.74■□□□□ 0.75
RN7SL498P-201ENST00000583650 NESP48681 1621 aa19.62■□□□□ 0.73
RN7SL498P-201ENST00000583650 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
RN7SL498P-201ENST00000583650 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
RN7SL498P-201ENST00000583650 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
RN7SL498P-201ENST00000583650 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
RN7SL498P-201ENST00000583650 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
RN7SL498P-201ENST00000583650 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
RN7SL498P-201ENST00000583650 CUX2O14529 1486 aa19.38■□□□□ 0.69
RN7SL498P-201ENST00000583650 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
RN7SL498P-201ENST00000583650 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
RN7SL498P-201ENST00000583650 CFTRP13569 1480 aa19.28■□□□□ 0.68
RN7SL498P-201ENST00000583650 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
RN7SL498P-201ENST00000583650 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
RN7SL498P-201ENST00000583650 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
RN7SL498P-201ENST00000583650 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
RN7SL498P-201ENST00000583650 WDR62O43379 1518 aa19.16■□□□□ 0.66
RN7SL498P-201ENST00000583650 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
RN7SL498P-201ENST00000583650 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
RN7SL498P-201ENST00000583650 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
RN7SL498P-201ENST00000583650 TOPBP1Q92547 1522 aa18.88■□□□□ 0.61
RN7SL498P-201ENST00000583650 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
RN7SL498P-201ENST00000583650 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
RN7SL498P-201ENST00000583650 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
RN7SL498P-201ENST00000583650 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
RN7SL498P-201ENST00000583650 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
RN7SL498P-201ENST00000583650 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
RN7SL498P-201ENST00000583650 CUX1P39880 1505 aa18.71■□□□□ 0.59
RN7SL498P-201ENST00000583650 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
RN7SL498P-201ENST00000583650 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
RN7SL498P-201ENST00000583650 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
RN7SL498P-201ENST00000583650 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
RN7SL498P-201ENST00000583650 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
RN7SL498P-201ENST00000583650 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
RN7SL498P-201ENST00000583650 SOGA1O94964 1423 aa18.55■□□□□ 0.56
RN7SL498P-201ENST00000583650 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
RN7SL498P-201ENST00000583650 CHD1O14646 1710 aa18.52■□□□□ 0.56
RN7SL498P-201ENST00000583650 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
RN7SL498P-201ENST00000583650 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
RN7SL498P-201ENST00000583650 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
RN7SL498P-201ENST00000583650 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
RN7SL498P-201ENST00000583650 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
RN7SL498P-201ENST00000583650 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
RN7SL498P-201ENST00000583650 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
RN7SL498P-201ENST00000583650 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
RN7SL498P-201ENST00000583650 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
RN7SL498P-201ENST00000583650 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
RN7SL498P-201ENST00000583650 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
RN7SL498P-201ENST00000583650 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
RN7SL498P-201ENST00000583650 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
RN7SL498P-201ENST00000583650 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
RN7SL498P-201ENST00000583650 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
RN7SL498P-201ENST00000583650 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
RN7SL498P-201ENST00000583650 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
RN7SL498P-201ENST00000583650 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
RN7SL498P-201ENST00000583650 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
RN7SL498P-201ENST00000583650 FBLN2P98095 1184 aa18.24■□□□□ 0.51
RN7SL498P-201ENST00000583650 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
RN7SL498P-201ENST00000583650 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
RN7SL498P-201ENST00000583650 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
RN7SL498P-201ENST00000583650 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
RN7SL498P-201ENST00000583650 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
RN7SL498P-201ENST00000583650 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
RN7SL498P-201ENST00000583650 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
RN7SL498P-201ENST00000583650 NUP160Q12769 1436 aa18.12■□□□□ 0.49
RN7SL498P-201ENST00000583650 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
RN7SL498P-201ENST00000583650 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
RN7SL498P-201ENST00000583650 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
RN7SL498P-201ENST00000583650 IGF1RP08069 1367 aa18.03■□□□□ 0.48
RN7SL498P-201ENST00000583650 CUL7Q14999 1698 aa18.03■□□□□ 0.48
RN7SL498P-201ENST00000583650 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
RN7SL498P-201ENST00000583650 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
RN7SL498P-201ENST00000583650 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms