RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
CCDC57-218ENST00000583593 ABCC9O60706 1549 aa30.8■■■□□ 2.52
CCDC57-218ENST00000583593 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
CCDC57-218ENST00000583593 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
CCDC57-218ENST00000583593 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
CCDC57-218ENST00000583593 NACADO15069 1562 aa29.02■■■□□ 2.24
CCDC57-218ENST00000583593 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
CCDC57-218ENST00000583593 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
CCDC57-218ENST00000583593 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
CCDC57-218ENST00000583593 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
CCDC57-218ENST00000583593 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
CCDC57-218ENST00000583593 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
CCDC57-218ENST00000583593 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
CCDC57-218ENST00000583593 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
CCDC57-218ENST00000583593 SCRIBQ14160 1630 aa27.94■■■□□ 2.06
CCDC57-218ENST00000583593 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
CCDC57-218ENST00000583593 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
CCDC57-218ENST00000583593 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
CCDC57-218ENST00000583593 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
CCDC57-218ENST00000583593 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
CCDC57-218ENST00000583593 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
CCDC57-218ENST00000583593 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
CCDC57-218ENST00000583593 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
CCDC57-218ENST00000583593 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
CCDC57-218ENST00000583593 CUX2O14529 1486 aa26.57■■□□□ 1.84
CCDC57-218ENST00000583593 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
CCDC57-218ENST00000583593 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
CCDC57-218ENST00000583593 NESP48681 1621 aa26.45■■□□□ 1.82
CCDC57-218ENST00000583593 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
CCDC57-218ENST00000583593 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
CCDC57-218ENST00000583593 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
CCDC57-218ENST00000583593 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
CCDC57-218ENST00000583593 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
CCDC57-218ENST00000583593 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
CCDC57-218ENST00000583593 PDS5BQ9NTI5 1447 aa26.04■■□□□ 1.76
CCDC57-218ENST00000583593 WIZO95785 1651 aa26■■□□□ 1.75
CCDC57-218ENST00000583593 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
CCDC57-218ENST00000583593 MRC2Q9UBG0 1479 aa25.84■■□□□ 1.73
CCDC57-218ENST00000583593 WDR62O43379 1518 aa25.8■■□□□ 1.72
CCDC57-218ENST00000583593 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
CCDC57-218ENST00000583593 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
CCDC57-218ENST00000583593 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
CCDC57-218ENST00000583593 CFTRP13569 1480 aa25.67■■□□□ 1.7
CCDC57-218ENST00000583593 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
CCDC57-218ENST00000583593 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
CCDC57-218ENST00000583593 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
CCDC57-218ENST00000583593 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
CCDC57-218ENST00000583593 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
CCDC57-218ENST00000583593 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
CCDC57-218ENST00000583593 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
CCDC57-218ENST00000583593 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
CCDC57-218ENST00000583593 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
CCDC57-218ENST00000583593 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
CCDC57-218ENST00000583593 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
CCDC57-218ENST00000583593 RIMBP3CA6NJZ7 1639 aa25.06■■□□□ 1.6
CCDC57-218ENST00000583593 RIMBP3BA6NNM3 1639 aa25.06■■□□□ 1.6
CCDC57-218ENST00000583593 RIMBP3Q9UFD9 1639 aa25.06■■□□□ 1.6
CCDC57-218ENST00000583593 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
CCDC57-218ENST00000583593 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
CCDC57-218ENST00000583593 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CCDC57-218ENST00000583593 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
CCDC57-218ENST00000583593 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
CCDC57-218ENST00000583593 CHD1O14646 1710 aa24.89■■□□□ 1.58
CCDC57-218ENST00000583593 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
CCDC57-218ENST00000583593 SOGA1O94964 1423 aa24.79■■□□□ 1.56
CCDC57-218ENST00000583593 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
CCDC57-218ENST00000583593 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
CCDC57-218ENST00000583593 FBLN2P98095 1184 aa24.76■■□□□ 1.55
CCDC57-218ENST00000583593 FGD5Q6ZNL6 1462 aa24.75■■□□□ 1.55
CCDC57-218ENST00000583593 CUX1P39880 1505 aa24.73■■□□□ 1.55
CCDC57-218ENST00000583593 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
CCDC57-218ENST00000583593 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
CCDC57-218ENST00000583593 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
CCDC57-218ENST00000583593 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
CCDC57-218ENST00000583593 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
CCDC57-218ENST00000583593 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
CCDC57-218ENST00000583593 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
CCDC57-218ENST00000583593 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
CCDC57-218ENST00000583593 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
CCDC57-218ENST00000583593 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
CCDC57-218ENST00000583593 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
CCDC57-218ENST00000583593 TRHP20396 242 aaPredicted RBP24.49■■□□□ 1.51
CCDC57-218ENST00000583593 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
CCDC57-218ENST00000583593 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
CCDC57-218ENST00000583593 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
CCDC57-218ENST00000583593 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
CCDC57-218ENST00000583593 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
CCDC57-218ENST00000583593 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
CCDC57-218ENST00000583593 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
CCDC57-218ENST00000583593 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
CCDC57-218ENST00000583593 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
CCDC57-218ENST00000583593 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
CCDC57-218ENST00000583593 NUP160Q12769 1436 aa24.22■■□□□ 1.47
CCDC57-218ENST00000583593 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CCDC57-218ENST00000583593 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
CCDC57-218ENST00000583593 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
CCDC57-218ENST00000583593 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
CCDC57-218ENST00000583593 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
CCDC57-218ENST00000583593 RUSC2Q8N2Y8 1516 aa23.93■■□□□ 1.42
CCDC57-218ENST00000583593 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms