RNA–Protein interactions for RNA: ENST00000583264.1

TMEM11-203, Transcript of transmembrane protein 11, humanhuman

TSL 2

Gene TMEM11, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM11-203ENST00000583264 NISCHQ9Y2I1 1504 aa47.32■■■■■ 5.17
TMEM11-203ENST00000583264 CCDC180Q9P1Z9 1646 aa42.21■■■■■ 4.35
TMEM11-203ENST00000583264 ABCC9O60706 1549 aa41.43■■■■■ 4.22
TMEM11-203ENST00000583264 RB1CC1Q8TDY2 1594 aa39.86■■■■□ 3.97
TMEM11-203ENST00000583264 NACADO15069 1562 aa39.8■■■■□ 3.96
TMEM11-203ENST00000583264 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
TMEM11-203ENST00000583264 DCAF8L2P0C7V8 631 aa39.47■■■■□ 3.91
TMEM11-203ENST00000583264 ZCCHC6Q5VYS8 1495 aaKnown RBP39.37■■■■□ 3.89
TMEM11-203ENST00000583264 DCAF1Q9Y4B6 1507 aa39.27■■■■□ 3.88
TMEM11-203ENST00000583264 UNC13AQ9UPW8 1703 aa38.75■■■■□ 3.79
TMEM11-203ENST00000583264 PABPN1Q86U42 306 aaKnown RBP eCLIP38.63■■■■□ 3.77
TMEM11-203ENST00000583264 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
TMEM11-203ENST00000583264 SHROOM4Q9ULL8 1493 aa38.42■■■■□ 3.74
TMEM11-203ENST00000583264 SCRIBQ14160 1630 aa38.32■■■■□ 3.73
TMEM11-203ENST00000583264 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
TMEM11-203ENST00000583264 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.61
TMEM11-203ENST00000583264 CC2D2AQ9P2K1 1620 aa37.49■■■■□ 3.59
TMEM11-203ENST00000583264 CECR2Q9BXF3 1484 aa37.33■■■■□ 3.57
TMEM11-203ENST00000583264 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
TMEM11-203ENST00000583264 BAZ1AQ9NRL2 1556 aaPredicted RBP36.73■■■■□ 3.47
TMEM11-203ENST00000583264 SMARCA4P51532 1647 aa36.73■■■■□ 3.47
TMEM11-203ENST00000583264 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
TMEM11-203ENST00000583264 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
TMEM11-203ENST00000583264 HMGXB3Q12766 1538 aa36.52■■■■□ 3.44
TMEM11-203ENST00000583264 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
TMEM11-203ENST00000583264 MROH2BQ7Z745 1585 aa36.38■■■■□ 3.41
TMEM11-203ENST00000583264 BAZ1BQ9UIG0 1483 aaKnown RBP36.32■■■■□ 3.41
TMEM11-203ENST00000583264 RSF1Q96T23 1441 aaPredicted RBP35.93■■■■□ 3.34
TMEM11-203ENST00000583264 WIZO95785 1651 aa35.9■■■■□ 3.34
TMEM11-203ENST00000583264 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
TMEM11-203ENST00000583264 LAMC3Q9Y6N6 1575 aa35.78■■■■□ 3.32
TMEM11-203ENST00000583264 NESP48681 1621 aa35.73■■■■□ 3.31
TMEM11-203ENST00000583264 TOP2AP11388 1531 aaKnown RBP35.65■■■■□ 3.3
TMEM11-203ENST00000583264 CUX2O14529 1486 aa35.63■■■■□ 3.29
TMEM11-203ENST00000583264 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
TMEM11-203ENST00000583264 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
TMEM11-203ENST00000583264 CFTRP13569 1480 aa35.36■■■■□ 3.25
TMEM11-203ENST00000583264 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
TMEM11-203ENST00000583264 KIF21AQ7Z4S6 1674 aa35.29■■■■□ 3.24
TMEM11-203ENST00000583264 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
TMEM11-203ENST00000583264 MRC2Q9UBG0 1479 aa35.17■■■■□ 3.22
TMEM11-203ENST00000583264 FANCD2Q9BXW9 1451 aa35.16■■■■□ 3.22
TMEM11-203ENST00000583264 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
TMEM11-203ENST00000583264 WDR62O43379 1518 aa35.07■■■■□ 3.21
TMEM11-203ENST00000583264 PRDM2Q13029 1718 aa34.94■■■■□ 3.18
TMEM11-203ENST00000583264 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
TMEM11-203ENST00000583264 URB2Q14146 1524 aaKnown RBP34.79■■■■□ 3.16
TMEM11-203ENST00000583264 ABCC8Q09428 1581 aa34.68■■■■□ 3.14
TMEM11-203ENST00000583264 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
TMEM11-203ENST00000583264 TOPBP1Q92547 1522 aa34.55■■■■□ 3.12
TMEM11-203ENST00000583264 DNMBPQ6XZF7 1577 aa34.51■■■■□ 3.12
TMEM11-203ENST00000583264 IFT140Q96RY7 1462 aa34.48■■■■□ 3.11
TMEM11-203ENST00000583264 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.07
TMEM11-203ENST00000583264 ZNF608Q9ULD9 1512 aaPredicted RBP34.21■■■■□ 3.07
TMEM11-203ENST00000583264 TARBP1Q13395 1621 aaKnown RBP34.19■■■■□ 3.06
TMEM11-203ENST00000583264 CUX1P39880 1505 aa34.15■■■■□ 3.06
TMEM11-203ENST00000583264 SOGA1O94964 1423 aa34.12■■■■□ 3.05
TMEM11-203ENST00000583264 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
TMEM11-203ENST00000583264 EIF4G3O43432 1585 aaKnown RBP34.08■■■■□ 3.05
TMEM11-203ENST00000583264 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
TMEM11-203ENST00000583264 OSCARQ8IYS5 282 aa34.06■■■■□ 3.04
TMEM11-203ENST00000583264 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
TMEM11-203ENST00000583264 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.03
TMEM11-203ENST00000583264 WRNQ14191 1432 aaPredicted RBP eCLIP33.9■■■■□ 3.02
TMEM11-203ENST00000583264 TDRD9Q8NDG6 1382 aaKnown RBP33.9■■■■□ 3.02
TMEM11-203ENST00000583264 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
TMEM11-203ENST00000583264 ABCA10Q8WWZ4 1543 aa33.84■■■■□ 3.01
TMEM11-203ENST00000583264 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
TMEM11-203ENST00000583264 GRIN2BQ13224 1484 aa33.79■■■■□ 3
TMEM11-203ENST00000583264 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■□□ 2.99
TMEM11-203ENST00000583264 SYNJ1O43426 1573 aa33.72■■■□□ 2.99
TMEM11-203ENST00000583264 GAPVD1Q14C86 1478 aa33.72■■■□□ 2.99
TMEM11-203ENST00000583264 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
TMEM11-203ENST00000583264 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
TMEM11-203ENST00000583264 CHD1O14646 1710 aa33.62■■■□□ 2.97
TMEM11-203ENST00000583264 FBLN2P98095 1184 aa33.61■■■□□ 2.97
TMEM11-203ENST00000583264 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
TMEM11-203ENST00000583264 CHMP7Q8WUX9 453 aaPredicted RBP33.58■■■□□ 2.97
TMEM11-203ENST00000583264 PBRM1Q86U86 1689 aa33.55■■■□□ 2.96
TMEM11-203ENST00000583264 ARHGEF11O15085 1522 aa33.45■■■□□ 2.95
TMEM11-203ENST00000583264 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
TMEM11-203ENST00000583264 RIMBP3CA6NJZ7 1639 aa33.42■■■□□ 2.94
TMEM11-203ENST00000583264 RIMBP3BA6NNM3 1639 aa33.42■■■□□ 2.94
TMEM11-203ENST00000583264 RIMBP3Q9UFD9 1639 aa33.42■■■□□ 2.94
TMEM11-203ENST00000583264 CLASP1Q7Z460 1538 aa33.39■■■□□ 2.94
TMEM11-203ENST00000583264 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
TMEM11-203ENST00000583264 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
TMEM11-203ENST00000583264 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
TMEM11-203ENST00000583264 GRIN2AQ12879 1464 aa33.32■■■□□ 2.92
TMEM11-203ENST00000583264 KIF27Q86VH2 1401 aa33.26■■■□□ 2.91
TMEM11-203ENST00000583264 NUP160Q12769 1436 aa33.23■■■□□ 2.91
TMEM11-203ENST00000583264 ARAP1Q96P48 1450 aa33.14■■■□□ 2.9
TMEM11-203ENST00000583264 IGF1RP08069 1367 aa33.12■■■□□ 2.89
TMEM11-203ENST00000583264 CYB5RLQ6IPT4 315 aa33.11■■■□□ 2.89
TMEM11-203ENST00000583264 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
TMEM11-203ENST00000583264 CUL7Q14999 1698 aa33.04■■■□□ 2.88
TMEM11-203ENST00000583264 SHROOM2Q13796 1616 aa32.95■■■□□ 2.87
TMEM11-203ENST00000583264 CARMIL1Q5VZK9 1371 aa32.92■■■□□ 2.86
TMEM11-203ENST00000583264 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
TMEM11-203ENST00000583264 JPH4Q96JJ6 628 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms