RNA–Protein interactions for RNA: ENST00000583217.1

EIF4A1-227, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-227ENST00000583217 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
EIF4A1-227ENST00000583217 ABCC9O60706 1549 aa21.96■■□□□ 1.11
EIF4A1-227ENST00000583217 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
EIF4A1-227ENST00000583217 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
EIF4A1-227ENST00000583217 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
EIF4A1-227ENST00000583217 NACADO15069 1562 aa20.45■□□□□ 0.86
EIF4A1-227ENST00000583217 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
EIF4A1-227ENST00000583217 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
EIF4A1-227ENST00000583217 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
EIF4A1-227ENST00000583217 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
EIF4A1-227ENST00000583217 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
EIF4A1-227ENST00000583217 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
EIF4A1-227ENST00000583217 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
EIF4A1-227ENST00000583217 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
EIF4A1-227ENST00000583217 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
EIF4A1-227ENST00000583217 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
EIF4A1-227ENST00000583217 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
EIF4A1-227ENST00000583217 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
EIF4A1-227ENST00000583217 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
EIF4A1-227ENST00000583217 CUX2O14529 1486 aa19.03■□□□□ 0.64
EIF4A1-227ENST00000583217 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
EIF4A1-227ENST00000583217 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
EIF4A1-227ENST00000583217 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
EIF4A1-227ENST00000583217 NESP48681 1621 aa18.8■□□□□ 0.6
EIF4A1-227ENST00000583217 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
EIF4A1-227ENST00000583217 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
EIF4A1-227ENST00000583217 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
EIF4A1-227ENST00000583217 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
EIF4A1-227ENST00000583217 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
EIF4A1-227ENST00000583217 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
EIF4A1-227ENST00000583217 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
EIF4A1-227ENST00000583217 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
EIF4A1-227ENST00000583217 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
EIF4A1-227ENST00000583217 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
EIF4A1-227ENST00000583217 MROH2BQ7Z745 1585 aa18.44■□□□□ 0.54
EIF4A1-227ENST00000583217 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
EIF4A1-227ENST00000583217 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
EIF4A1-227ENST00000583217 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
EIF4A1-227ENST00000583217 WDR62O43379 1518 aa18.28■□□□□ 0.52
EIF4A1-227ENST00000583217 WIZO95785 1651 aa18.15■□□□□ 0.5
EIF4A1-227ENST00000583217 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
EIF4A1-227ENST00000583217 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
EIF4A1-227ENST00000583217 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
EIF4A1-227ENST00000583217 CFTRP13569 1480 aa18.07■□□□□ 0.48
EIF4A1-227ENST00000583217 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
EIF4A1-227ENST00000583217 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
EIF4A1-227ENST00000583217 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
EIF4A1-227ENST00000583217 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
EIF4A1-227ENST00000583217 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
EIF4A1-227ENST00000583217 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
EIF4A1-227ENST00000583217 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
EIF4A1-227ENST00000583217 ARHGEF11O15085 1522 aa17.83■□□□□ 0.45
EIF4A1-227ENST00000583217 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
EIF4A1-227ENST00000583217 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
EIF4A1-227ENST00000583217 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
EIF4A1-227ENST00000583217 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
EIF4A1-227ENST00000583217 PRDM2Q13029 1718 aa17.7■□□□□ 0.42
EIF4A1-227ENST00000583217 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
EIF4A1-227ENST00000583217 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.422e-23■□□□□ 9.7
EIF4A1-227ENST00000583217 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
EIF4A1-227ENST00000583217 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
EIF4A1-227ENST00000583217 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
EIF4A1-227ENST00000583217 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
EIF4A1-227ENST00000583217 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
EIF4A1-227ENST00000583217 CHD1O14646 1710 aa17.59■□□□□ 0.41
EIF4A1-227ENST00000583217 FBLN2P98095 1184 aa17.56■□□□□ 0.4
EIF4A1-227ENST00000583217 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
EIF4A1-227ENST00000583217 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
EIF4A1-227ENST00000583217 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
EIF4A1-227ENST00000583217 SOGA1O94964 1423 aa17.46■□□□□ 0.39
EIF4A1-227ENST00000583217 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
EIF4A1-227ENST00000583217 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
EIF4A1-227ENST00000583217 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
EIF4A1-227ENST00000583217 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
EIF4A1-227ENST00000583217 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
EIF4A1-227ENST00000583217 CUX1P39880 1505 aa17.33■□□□□ 0.37
EIF4A1-227ENST00000583217 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
EIF4A1-227ENST00000583217 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
EIF4A1-227ENST00000583217 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
EIF4A1-227ENST00000583217 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
EIF4A1-227ENST00000583217 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
EIF4A1-227ENST00000583217 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
EIF4A1-227ENST00000583217 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
EIF4A1-227ENST00000583217 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
EIF4A1-227ENST00000583217 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
EIF4A1-227ENST00000583217 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
EIF4A1-227ENST00000583217 NUP160Q12769 1436 aa17.1■□□□□ 0.33
EIF4A1-227ENST00000583217 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
EIF4A1-227ENST00000583217 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
EIF4A1-227ENST00000583217 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
EIF4A1-227ENST00000583217 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
EIF4A1-227ENST00000583217 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
EIF4A1-227ENST00000583217 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
EIF4A1-227ENST00000583217 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
EIF4A1-227ENST00000583217 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
EIF4A1-227ENST00000583217 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
EIF4A1-227ENST00000583217 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
EIF4A1-227ENST00000583217 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
EIF4A1-227ENST00000583217 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
EIF4A1-227ENST00000583217 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms