RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
CDK5RAP3-226ENST00000583182 ABCC9O60706 1549 aa34.03■■■■□ 3.04
CDK5RAP3-226ENST00000583182 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
CDK5RAP3-226ENST00000583182 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
CDK5RAP3-226ENST00000583182 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
CDK5RAP3-226ENST00000583182 NACADO15069 1562 aa31.98■■■□□ 2.71
CDK5RAP3-226ENST00000583182 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
CDK5RAP3-226ENST00000583182 PABPN1Q86U42 306 aaKnown RBP eCLIP31.64■■■□□ 2.66
CDK5RAP3-226ENST00000583182 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
CDK5RAP3-226ENST00000583182 MYO15BQ96JP2 1530 aa31.47■■■□□ 2.63
CDK5RAP3-226ENST00000583182 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
CDK5RAP3-226ENST00000583182 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
CDK5RAP3-226ENST00000583182 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
CDK5RAP3-226ENST00000583182 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
CDK5RAP3-226ENST00000583182 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
CDK5RAP3-226ENST00000583182 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
CDK5RAP3-226ENST00000583182 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
CDK5RAP3-226ENST00000583182 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
CDK5RAP3-226ENST00000583182 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
CDK5RAP3-226ENST00000583182 NCAPD3P42695 1498 aa29.54■■■□□ 2.32
CDK5RAP3-226ENST00000583182 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
CDK5RAP3-226ENST00000583182 CUX2O14529 1486 aa29.4■■■□□ 2.3
CDK5RAP3-226ENST00000583182 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
CDK5RAP3-226ENST00000583182 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
CDK5RAP3-226ENST00000583182 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
CDK5RAP3-226ENST00000583182 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
CDK5RAP3-226ENST00000583182 NESP48681 1621 aa29.19■■■□□ 2.26
CDK5RAP3-226ENST00000583182 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
CDK5RAP3-226ENST00000583182 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
CDK5RAP3-226ENST00000583182 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
CDK5RAP3-226ENST00000583182 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.22
CDK5RAP3-226ENST00000583182 THOC2Q8NI27 1593 aaKnown RBP28.94■■■□□ 2.22
CDK5RAP3-226ENST00000583182 LAMC3Q9Y6N6 1575 aa28.91■■■□□ 2.22
CDK5RAP3-226ENST00000583182 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
CDK5RAP3-226ENST00000583182 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
CDK5RAP3-226ENST00000583182 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
CDK5RAP3-226ENST00000583182 WIZO95785 1651 aa28.6■■■□□ 2.17
CDK5RAP3-226ENST00000583182 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
CDK5RAP3-226ENST00000583182 WDR62O43379 1518 aa28.47■■■□□ 2.15
CDK5RAP3-226ENST00000583182 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
CDK5RAP3-226ENST00000583182 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CDK5RAP3-226ENST00000583182 TRIM41Q8WV44 630 aa28.26■■■□□ 2.11
CDK5RAP3-226ENST00000583182 CFTRP13569 1480 aa28.26■■■□□ 2.11
CDK5RAP3-226ENST00000583182 RSF1Q96T23 1441 aaPredicted RBP28.25■■■□□ 2.11
CDK5RAP3-226ENST00000583182 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
CDK5RAP3-226ENST00000583182 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
CDK5RAP3-226ENST00000583182 OSCARQ8IYS5 282 aa28■■■□□ 2.07
CDK5RAP3-226ENST00000583182 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
CDK5RAP3-226ENST00000583182 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
CDK5RAP3-226ENST00000583182 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
CDK5RAP3-226ENST00000583182 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
CDK5RAP3-226ENST00000583182 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
CDK5RAP3-226ENST00000583182 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
CDK5RAP3-226ENST00000583182 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
CDK5RAP3-226ENST00000583182 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
CDK5RAP3-226ENST00000583182 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
CDK5RAP3-226ENST00000583182 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
CDK5RAP3-226ENST00000583182 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
CDK5RAP3-226ENST00000583182 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
CDK5RAP3-226ENST00000583182 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
CDK5RAP3-226ENST00000583182 AQRO60306 1485 aaKnown RBP eCLIP27.51■■■□□ 22e-7■■■□□ 16.6
CDK5RAP3-226ENST00000583182 CHD1O14646 1710 aa27.5■■□□□ 1.99
CDK5RAP3-226ENST00000583182 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
CDK5RAP3-226ENST00000583182 CYB5RLQ6IPT4 315 aa27.38■■□□□ 1.97
CDK5RAP3-226ENST00000583182 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
CDK5RAP3-226ENST00000583182 FBLN2P98095 1184 aa27.35■■□□□ 1.97
CDK5RAP3-226ENST00000583182 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
CDK5RAP3-226ENST00000583182 SOGA1O94964 1423 aa27.31■■□□□ 1.96
CDK5RAP3-226ENST00000583182 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
CDK5RAP3-226ENST00000583182 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
CDK5RAP3-226ENST00000583182 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
CDK5RAP3-226ENST00000583182 CUX1P39880 1505 aa27.21■■□□□ 1.95
CDK5RAP3-226ENST00000583182 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
CDK5RAP3-226ENST00000583182 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
CDK5RAP3-226ENST00000583182 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
CDK5RAP3-226ENST00000583182 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
CDK5RAP3-226ENST00000583182 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CDK5RAP3-226ENST00000583182 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
CDK5RAP3-226ENST00000583182 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CDK5RAP3-226ENST00000583182 SYNJ2O15056 1496 aa27.04■■□□□ 1.92
CDK5RAP3-226ENST00000583182 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
CDK5RAP3-226ENST00000583182 GAPVD1Q14C86 1478 aa26.98■■□□□ 1.91
CDK5RAP3-226ENST00000583182 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
CDK5RAP3-226ENST00000583182 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
CDK5RAP3-226ENST00000583182 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
CDK5RAP3-226ENST00000583182 GRIN2AQ12879 1464 aa26.76■■□□□ 1.87
CDK5RAP3-226ENST00000583182 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
CDK5RAP3-226ENST00000583182 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
CDK5RAP3-226ENST00000583182 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
CDK5RAP3-226ENST00000583182 BIVM-ERCC5R4GMW8 1640 aa26.71■■□□□ 1.87
CDK5RAP3-226ENST00000583182 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
CDK5RAP3-226ENST00000583182 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
CDK5RAP3-226ENST00000583182 NUP160Q12769 1436 aa26.69■■□□□ 1.86
CDK5RAP3-226ENST00000583182 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
CDK5RAP3-226ENST00000583182 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
CDK5RAP3-226ENST00000583182 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
CDK5RAP3-226ENST00000583182 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
CDK5RAP3-226ENST00000583182 PRG4Q92954 1404 aaPredicted RBP26.44■■□□□ 1.82
CDK5RAP3-226ENST00000583182 KIF13AQ9H1H9 1805 aa26.4■■□□□ 1.82
CDK5RAP3-226ENST00000583182 JPH4Q96JJ6 628 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms