RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 NISCHQ9Y2I1 1504 aa25.91■■□□□ 1.74
NUP85-220ENST00000583070 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
NUP85-220ENST00000583070 ABCC9O60706 1549 aa22.18■■□□□ 1.14
NUP85-220ENST00000583070 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
NUP85-220ENST00000583070 NACADO15069 1562 aa21.56■■□□□ 1.04
NUP85-220ENST00000583070 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
NUP85-220ENST00000583070 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
NUP85-220ENST00000583070 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
NUP85-220ENST00000583070 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
NUP85-220ENST00000583070 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
NUP85-220ENST00000583070 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
NUP85-220ENST00000583070 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
NUP85-220ENST00000583070 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
NUP85-220ENST00000583070 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.96e-11■■■□□ 15.6
NUP85-220ENST00000583070 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
NUP85-220ENST00000583070 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
NUP85-220ENST00000583070 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
NUP85-220ENST00000583070 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
NUP85-220ENST00000583070 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
NUP85-220ENST00000583070 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.81
NUP85-220ENST00000583070 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
NUP85-220ENST00000583070 PEG3Q9GZU2 1588 aa19.93■□□□□ 0.78
NUP85-220ENST00000583070 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
NUP85-220ENST00000583070 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
NUP85-220ENST00000583070 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
NUP85-220ENST00000583070 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
NUP85-220ENST00000583070 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
NUP85-220ENST00000583070 WIZO95785 1651 aa19.78■□□□□ 0.76
NUP85-220ENST00000583070 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
NUP85-220ENST00000583070 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
NUP85-220ENST00000583070 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.69
NUP85-220ENST00000583070 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
NUP85-220ENST00000583070 CCDC88BA6NC98 1476 aa19.3■□□□□ 0.68
NUP85-220ENST00000583070 NESP48681 1621 aa19.28■□□□□ 0.68
NUP85-220ENST00000583070 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
NUP85-220ENST00000583070 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
NUP85-220ENST00000583070 CFTRP13569 1480 aa19.22■□□□□ 0.67
NUP85-220ENST00000583070 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
NUP85-220ENST00000583070 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
NUP85-220ENST00000583070 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
NUP85-220ENST00000583070 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
NUP85-220ENST00000583070 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
NUP85-220ENST00000583070 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
NUP85-220ENST00000583070 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
NUP85-220ENST00000583070 WDR62O43379 1518 aa18.91■□□□□ 0.62
NUP85-220ENST00000583070 CUX2O14529 1486 aa18.9■□□□□ 0.62
NUP85-220ENST00000583070 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
NUP85-220ENST00000583070 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
NUP85-220ENST00000583070 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
NUP85-220ENST00000583070 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
NUP85-220ENST00000583070 CUX1P39880 1505 aa18.72■□□□□ 0.59
NUP85-220ENST00000583070 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
NUP85-220ENST00000583070 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
NUP85-220ENST00000583070 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
NUP85-220ENST00000583070 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
NUP85-220ENST00000583070 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
NUP85-220ENST00000583070 TARBP1Q13395 1621 aaKnown RBP18.61■□□□□ 0.57
NUP85-220ENST00000583070 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
NUP85-220ENST00000583070 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
NUP85-220ENST00000583070 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
NUP85-220ENST00000583070 SOGA1O94964 1423 aa18.5■□□□□ 0.55
NUP85-220ENST00000583070 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
NUP85-220ENST00000583070 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
NUP85-220ENST00000583070 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
NUP85-220ENST00000583070 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
NUP85-220ENST00000583070 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
NUP85-220ENST00000583070 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.533e-7■■■■□ 21.7
NUP85-220ENST00000583070 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
NUP85-220ENST00000583070 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
NUP85-220ENST00000583070 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
NUP85-220ENST00000583070 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
NUP85-220ENST00000583070 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
NUP85-220ENST00000583070 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
NUP85-220ENST00000583070 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
NUP85-220ENST00000583070 CHD1O14646 1710 aa18.24■□□□□ 0.51
NUP85-220ENST00000583070 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
NUP85-220ENST00000583070 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
NUP85-220ENST00000583070 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
NUP85-220ENST00000583070 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
NUP85-220ENST00000583070 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
NUP85-220ENST00000583070 CUL7Q14999 1698 aa18.17■□□□□ 0.5
NUP85-220ENST00000583070 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
NUP85-220ENST00000583070 IGF1RP08069 1367 aa18.12■□□□□ 0.49
NUP85-220ENST00000583070 RUSC2Q8N2Y8 1516 aa18.11■□□□□ 0.49
NUP85-220ENST00000583070 GRIN2AQ12879 1464 aa18.08■□□□□ 0.49
NUP85-220ENST00000583070 EEA1Q15075 1411 aa18.06■□□□□ 0.48
NUP85-220ENST00000583070 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
NUP85-220ENST00000583070 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
NUP85-220ENST00000583070 FBLN2P98095 1184 aa18.04■□□□□ 0.48
NUP85-220ENST00000583070 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
NUP85-220ENST00000583070 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
NUP85-220ENST00000583070 CEP170Q5SW79 1584 aa18■□□□□ 0.47
NUP85-220ENST00000583070 NUP160Q12769 1436 aa18■□□□□ 0.47
NUP85-220ENST00000583070 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
NUP85-220ENST00000583070 PRXQ9BXM0 1461 aa17.96■□□□□ 0.47
NUP85-220ENST00000583070 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
NUP85-220ENST00000583070 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
NUP85-220ENST00000583070 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
NUP85-220ENST00000583070 KIF21BO75037 1637 aa17.9■□□□□ 0.46
NUP85-220ENST00000583070 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms