RNA–Protein interactions for RNA: ENST00000582547.5

ATG13-229, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-229ENST00000582547 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
ATG13-229ENST00000582547 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
ATG13-229ENST00000582547 ABCC9O60706 1549 aa35.16■■■■□ 3.22
ATG13-229ENST00000582547 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
ATG13-229ENST00000582547 NACADO15069 1562 aa33.64■■■□□ 2.98
ATG13-229ENST00000582547 MYO15BQ96JP2 1530 aa33.39■■■□□ 2.94
ATG13-229ENST00000582547 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
ATG13-229ENST00000582547 ZCCHC6Q5VYS8 1495 aaKnown RBP33.19■■■□□ 2.9
ATG13-229ENST00000582547 DCAF1Q9Y4B6 1507 aa33.09■■■□□ 2.89
ATG13-229ENST00000582547 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
ATG13-229ENST00000582547 PABPN1Q86U42 306 aaKnown RBP eCLIP32.78■■■□□ 2.84
ATG13-229ENST00000582547 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
ATG13-229ENST00000582547 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
ATG13-229ENST00000582547 SHROOM4Q9ULL8 1493 aa32.44■■■□□ 2.78
ATG13-229ENST00000582547 SCRIBQ14160 1630 aa32.43■■■□□ 2.78
ATG13-229ENST00000582547 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
ATG13-229ENST00000582547 CC2D2AQ9P2K1 1620 aa31.84■■■□□ 2.69
ATG13-229ENST00000582547 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
ATG13-229ENST00000582547 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
ATG13-229ENST00000582547 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
ATG13-229ENST00000582547 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
ATG13-229ENST00000582547 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
ATG13-229ENST00000582547 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
ATG13-229ENST00000582547 HMGXB3Q12766 1538 aa30.86■■■□□ 2.53
ATG13-229ENST00000582547 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
ATG13-229ENST00000582547 MROH2BQ7Z745 1585 aa30.74■■■□□ 2.51
ATG13-229ENST00000582547 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
ATG13-229ENST00000582547 WIZO95785 1651 aa30.37■■■□□ 2.45
ATG13-229ENST00000582547 NESP48681 1621 aa30.34■■■□□ 2.45
ATG13-229ENST00000582547 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
ATG13-229ENST00000582547 LAMC3Q9Y6N6 1575 aa30.28■■■□□ 2.44
ATG13-229ENST00000582547 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
ATG13-229ENST00000582547 CUX2O14529 1486 aa30.24■■■□□ 2.43
ATG13-229ENST00000582547 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
ATG13-229ENST00000582547 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
ATG13-229ENST00000582547 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
ATG13-229ENST00000582547 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
ATG13-229ENST00000582547 KIF21AQ7Z4S6 1674 aa29.98■■■□□ 2.39
ATG13-229ENST00000582547 CFTRP13569 1480 aa29.87■■■□□ 2.37
ATG13-229ENST00000582547 MRC2Q9UBG0 1479 aa29.77■■■□□ 2.36
ATG13-229ENST00000582547 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
ATG13-229ENST00000582547 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
ATG13-229ENST00000582547 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
ATG13-229ENST00000582547 WDR62O43379 1518 aa29.71■■■□□ 2.35
ATG13-229ENST00000582547 CCDC88BA6NC98 1476 aa29.69■■■□□ 2.34
ATG13-229ENST00000582547 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
ATG13-229ENST00000582547 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
ATG13-229ENST00000582547 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
ATG13-229ENST00000582547 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
ATG13-229ENST00000582547 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
ATG13-229ENST00000582547 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
ATG13-229ENST00000582547 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
ATG13-229ENST00000582547 ZNF608Q9ULD9 1512 aaPredicted RBP29.01■■■□□ 2.23
ATG13-229ENST00000582547 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
ATG13-229ENST00000582547 POLA1P09884 1462 aaPredicted RBP28.95■■■□□ 2.22
ATG13-229ENST00000582547 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
ATG13-229ENST00000582547 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
ATG13-229ENST00000582547 CUX1P39880 1505 aa28.86■■■□□ 2.21
ATG13-229ENST00000582547 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
ATG13-229ENST00000582547 SOGA1O94964 1423 aa28.8■■■□□ 2.2
ATG13-229ENST00000582547 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
ATG13-229ENST00000582547 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
ATG13-229ENST00000582547 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
ATG13-229ENST00000582547 TDRD9Q8NDG6 1382 aaKnown RBP28.66■■■□□ 2.18
ATG13-229ENST00000582547 CHD1O14646 1710 aa28.58■■■□□ 2.17
ATG13-229ENST00000582547 ABCA10Q8WWZ4 1543 aa28.55■■■□□ 2.16
ATG13-229ENST00000582547 TOP2BQ02880 1626 aa28.54■■■□□ 2.16
ATG13-229ENST00000582547 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
ATG13-229ENST00000582547 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
ATG13-229ENST00000582547 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
ATG13-229ENST00000582547 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
ATG13-229ENST00000582547 MAGI1Q96QZ7 1491 aaPredicted RBP28.52■■■□□ 2.16
ATG13-229ENST00000582547 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
ATG13-229ENST00000582547 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
ATG13-229ENST00000582547 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
ATG13-229ENST00000582547 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
ATG13-229ENST00000582547 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
ATG13-229ENST00000582547 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
ATG13-229ENST00000582547 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
ATG13-229ENST00000582547 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
ATG13-229ENST00000582547 FBLN2P98095 1184 aa28.43■■■□□ 2.14
ATG13-229ENST00000582547 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
ATG13-229ENST00000582547 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
ATG13-229ENST00000582547 CHMP7Q8WUX9 453 aaPredicted RBP28.35■■■□□ 2.13
ATG13-229ENST00000582547 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
ATG13-229ENST00000582547 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
ATG13-229ENST00000582547 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
ATG13-229ENST00000582547 GRIN2AQ12879 1464 aa28.16■■■□□ 2.1
ATG13-229ENST00000582547 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
ATG13-229ENST00000582547 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
ATG13-229ENST00000582547 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
ATG13-229ENST00000582547 NUP160Q12769 1436 aa28.09■■■□□ 2.09
ATG13-229ENST00000582547 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
ATG13-229ENST00000582547 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
ATG13-229ENST00000582547 SHROOM2Q13796 1616 aa27.93■■■□□ 2.06
ATG13-229ENST00000582547 IGF1RP08069 1367 aa27.92■■■□□ 2.06
ATG13-229ENST00000582547 CUL7Q14999 1698 aa27.86■■■□□ 2.05
ATG13-229ENST00000582547 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
ATG13-229ENST00000582547 RUSC2Q8N2Y8 1516 aa27.8■■■□□ 2.04
ATG13-229ENST00000582547 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 413.9 ms