RNA–Protein interactions for RNA: ENST00000582291.1

AC011840.1-201, humanhuman

TSL 3

Gene AC011840.1, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.1-201ENST00000582291 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
AC011840.1-201ENST00000582291 ABCC9O60706 1549 aa27.89■■■□□ 2.06
AC011840.1-201ENST00000582291 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
AC011840.1-201ENST00000582291 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
AC011840.1-201ENST00000582291 NACADO15069 1562 aa26.3■■□□□ 1.8
AC011840.1-201ENST00000582291 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
AC011840.1-201ENST00000582291 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
AC011840.1-201ENST00000582291 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
AC011840.1-201ENST00000582291 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
AC011840.1-201ENST00000582291 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
AC011840.1-201ENST00000582291 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
AC011840.1-201ENST00000582291 ZCCHC6Q5VYS8 1495 aaKnown RBP25.75■■□□□ 1.71
AC011840.1-201ENST00000582291 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
AC011840.1-201ENST00000582291 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
AC011840.1-201ENST00000582291 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
AC011840.1-201ENST00000582291 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
AC011840.1-201ENST00000582291 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
AC011840.1-201ENST00000582291 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
AC011840.1-201ENST00000582291 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
AC011840.1-201ENST00000582291 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
AC011840.1-201ENST00000582291 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
AC011840.1-201ENST00000582291 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
AC011840.1-201ENST00000582291 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
AC011840.1-201ENST00000582291 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.45
AC011840.1-201ENST00000582291 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
AC011840.1-201ENST00000582291 NESP48681 1621 aa24.01■■□□□ 1.43
AC011840.1-201ENST00000582291 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
AC011840.1-201ENST00000582291 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
AC011840.1-201ENST00000582291 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
AC011840.1-201ENST00000582291 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
AC011840.1-201ENST00000582291 CUX2O14529 1486 aa23.94■■□□□ 1.42
AC011840.1-201ENST00000582291 WIZO95785 1651 aa23.73■■□□□ 1.39
AC011840.1-201ENST00000582291 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
AC011840.1-201ENST00000582291 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
AC011840.1-201ENST00000582291 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
AC011840.1-201ENST00000582291 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
AC011840.1-201ENST00000582291 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
AC011840.1-201ENST00000582291 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
AC011840.1-201ENST00000582291 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
AC011840.1-201ENST00000582291 WDR62O43379 1518 aa23.35■■□□□ 1.33
AC011840.1-201ENST00000582291 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
AC011840.1-201ENST00000582291 CFTRP13569 1480 aa23.31■■□□□ 1.32
AC011840.1-201ENST00000582291 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
AC011840.1-201ENST00000582291 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
AC011840.1-201ENST00000582291 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
AC011840.1-201ENST00000582291 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.29
AC011840.1-201ENST00000582291 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
AC011840.1-201ENST00000582291 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
AC011840.1-201ENST00000582291 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
AC011840.1-201ENST00000582291 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
AC011840.1-201ENST00000582291 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
AC011840.1-201ENST00000582291 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
AC011840.1-201ENST00000582291 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
AC011840.1-201ENST00000582291 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
AC011840.1-201ENST00000582291 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
AC011840.1-201ENST00000582291 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
AC011840.1-201ENST00000582291 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
AC011840.1-201ENST00000582291 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
AC011840.1-201ENST00000582291 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
AC011840.1-201ENST00000582291 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
AC011840.1-201ENST00000582291 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
AC011840.1-201ENST00000582291 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
AC011840.1-201ENST00000582291 CHD1O14646 1710 aa22.58■■□□□ 1.21
AC011840.1-201ENST00000582291 SOGA1O94964 1423 aa22.56■■□□□ 1.2
AC011840.1-201ENST00000582291 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
AC011840.1-201ENST00000582291 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
AC011840.1-201ENST00000582291 CUX1P39880 1505 aa22.53■■□□□ 1.2
AC011840.1-201ENST00000582291 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
AC011840.1-201ENST00000582291 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
AC011840.1-201ENST00000582291 FBLN2P98095 1184 aa22.51■■□□□ 1.19
AC011840.1-201ENST00000582291 SNAPC4Q5SXM2 1469 aa22.41■■□□□ 1.18
AC011840.1-201ENST00000582291 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
AC011840.1-201ENST00000582291 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
AC011840.1-201ENST00000582291 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
AC011840.1-201ENST00000582291 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
AC011840.1-201ENST00000582291 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
AC011840.1-201ENST00000582291 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
AC011840.1-201ENST00000582291 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
AC011840.1-201ENST00000582291 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
AC011840.1-201ENST00000582291 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
AC011840.1-201ENST00000582291 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
AC011840.1-201ENST00000582291 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
AC011840.1-201ENST00000582291 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
AC011840.1-201ENST00000582291 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
AC011840.1-201ENST00000582291 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
AC011840.1-201ENST00000582291 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
AC011840.1-201ENST00000582291 TOP2BQ02880 1626 aa22.14■■□□□ 1.14
AC011840.1-201ENST00000582291 TRHP20396 242 aaPredicted RBP22.13■■□□□ 1.13
AC011840.1-201ENST00000582291 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
AC011840.1-201ENST00000582291 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
AC011840.1-201ENST00000582291 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
AC011840.1-201ENST00000582291 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
AC011840.1-201ENST00000582291 NUP160Q12769 1436 aa21.97■■□□□ 1.11
AC011840.1-201ENST00000582291 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
AC011840.1-201ENST00000582291 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
AC011840.1-201ENST00000582291 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
AC011840.1-201ENST00000582291 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
AC011840.1-201ENST00000582291 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
AC011840.1-201ENST00000582291 IGF1RP08069 1367 aa21.74■■□□□ 1.07
AC011840.1-201ENST00000582291 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms