RNA–Protein interactions for RNA: ENST00000582228.2

RN7SL356P-201, Transcript of RNA, 7SL, cytoplasmic 356, pseudogene, humanhuman

BASIC

Gene RN7SL356P, Length 248 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL356P-201ENST00000582228 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
RN7SL356P-201ENST00000582228 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
RN7SL356P-201ENST00000582228 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
RN7SL356P-201ENST00000582228 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
RN7SL356P-201ENST00000582228 ZCCHC6Q5VYS8 1495 aaKnown RBP10.6□□□□□ -0.71
RN7SL356P-201ENST00000582228 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
RN7SL356P-201ENST00000582228 PHF23Q9BUL5 403 aaPredicted RBP10.52□□□□□ -0.73
RN7SL356P-201ENST00000582228 MYO15BQ96JP2 1530 aa10.47□□□□□ -0.73
RN7SL356P-201ENST00000582228 ABCC9O60706 1549 aa10.46□□□□□ -0.74
RN7SL356P-201ENST00000582228 NACADO15069 1562 aa10.38□□□□□ -0.75
RN7SL356P-201ENST00000582228 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
RN7SL356P-201ENST00000582228 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
RN7SL356P-201ENST00000582228 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
RN7SL356P-201ENST00000582228 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
RN7SL356P-201ENST00000582228 UNC13AQ9UPW8 1703 aa10.09□□□□□ -0.79
RN7SL356P-201ENST00000582228 SHROOM4Q9ULL8 1493 aa10□□□□□ -0.81
RN7SL356P-201ENST00000582228 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
RN7SL356P-201ENST00000582228 BAZ1AQ9NRL2 1556 aaPredicted RBP9.79□□□□□ -0.84
RN7SL356P-201ENST00000582228 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
RN7SL356P-201ENST00000582228 SMARCA4P51532 1647 aa9.74□□□□□ -0.85
RN7SL356P-201ENST00000582228 CECR2Q9BXF3 1484 aa9.72□□□□□ -0.85
RN7SL356P-201ENST00000582228 PEG3Q9GZU2 1588 aa9.69□□□□□ -0.86
RN7SL356P-201ENST00000582228 MROH2BQ7Z745 1585 aa9.68□□□□□ -0.86
RN7SL356P-201ENST00000582228 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
RN7SL356P-201ENST00000582228 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
RN7SL356P-201ENST00000582228 FOXD1Q16676 465 aa9.65□□□□□ -0.86
RN7SL356P-201ENST00000582228 SMARCA2P51531 1590 aa9.63□□□□□ -0.87
RN7SL356P-201ENST00000582228 WIZO95785 1651 aa9.61□□□□□ -0.87
RN7SL356P-201ENST00000582228 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
RN7SL356P-201ENST00000582228 TOP2AP11388 1531 aaKnown RBP9.57□□□□□ -0.88
RN7SL356P-201ENST00000582228 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
RN7SL356P-201ENST00000582228 SUPT5HO00267 1087 aaKnown RBP9.55□□□□□ -0.88
RN7SL356P-201ENST00000582228 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
RN7SL356P-201ENST00000582228 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
RN7SL356P-201ENST00000582228 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
RN7SL356P-201ENST00000582228 PLPPR3Q6T4P5 718 aa9.49□□□□□ -0.89
RN7SL356P-201ENST00000582228 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.91
RN7SL356P-201ENST00000582228 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
RN7SL356P-201ENST00000582228 PPP6R1Q9UPN7 881 aa9.33□□□□□ -0.92
RN7SL356P-201ENST00000582228 ADRA2BP18089 450 aa9.3□□□□□ -0.92
RN7SL356P-201ENST00000582228 CFTRP13569 1480 aa9.28□□□□□ -0.92
RN7SL356P-201ENST00000582228 LAMC3Q9Y6N6 1575 aa9.28□□□□□ -0.92
RN7SL356P-201ENST00000582228 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
RN7SL356P-201ENST00000582228 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
RN7SL356P-201ENST00000582228 PDS5BQ9NTI5 1447 aa9.15□□□□□ -0.94
RN7SL356P-201ENST00000582228 BIVM-ERCC5R4GMW8 1640 aa9.15□□□□□ -0.94
RN7SL356P-201ENST00000582228 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.95
RN7SL356P-201ENST00000582228 NESP48681 1621 aa9.14□□□□□ -0.95
RN7SL356P-201ENST00000582228 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
RN7SL356P-201ENST00000582228 TOP2BQ02880 1626 aa9.13□□□□□ -0.95
RN7SL356P-201ENST00000582228 ABCC8Q09428 1581 aa9.13□□□□□ -0.95
RN7SL356P-201ENST00000582228 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
RN7SL356P-201ENST00000582228 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
RN7SL356P-201ENST00000582228 SYNJ1O43426 1573 aa9.11□□□□□ -0.95
RN7SL356P-201ENST00000582228 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
RN7SL356P-201ENST00000582228 CUX1P39880 1505 aa9.08□□□□□ -0.96
RN7SL356P-201ENST00000582228 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
RN7SL356P-201ENST00000582228 TRIM41Q8WV44 630 aa9.05□□□□□ -0.96
RN7SL356P-201ENST00000582228 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
RN7SL356P-201ENST00000582228 PIAS4Q8N2W9 510 aaPredicted RBP9.04□□□□□ -0.96
RN7SL356P-201ENST00000582228 WDR62O43379 1518 aa9.04□□□□□ -0.96
RN7SL356P-201ENST00000582228 THOC2Q8NI27 1593 aaKnown RBP9.03□□□□□ -0.96
RN7SL356P-201ENST00000582228 URB2Q14146 1524 aaKnown RBP9.03□□□□□ -0.96
RN7SL356P-201ENST00000582228 ERCC6Q03468 1493 aa9.02□□□□□ -0.96
RN7SL356P-201ENST00000582228 EEA1Q15075 1411 aa9.02□□□□□ -0.97
RN7SL356P-201ENST00000582228 WDR97A6NE52 1622 aa9□□□□□ -0.97
RN7SL356P-201ENST00000582228 FGD5Q6ZNL6 1462 aa9□□□□□ -0.97
RN7SL356P-201ENST00000582228 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
RN7SL356P-201ENST00000582228 ABCA10Q8WWZ4 1543 aa8.97□□□□□ -0.97
RN7SL356P-201ENST00000582228 TARBP1Q13395 1621 aaKnown RBP8.95□□□□□ -0.98
RN7SL356P-201ENST00000582228 KIF27Q86VH2 1401 aa8.93□□□□□ -0.98
RN7SL356P-201ENST00000582228 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
RN7SL356P-201ENST00000582228 ABCA5Q8WWZ7 1642 aa8.93□□□□□ -0.98
RN7SL356P-201ENST00000582228 SOGA1O94964 1423 aa8.92□□□□□ -0.98
RN7SL356P-201ENST00000582228 CUX2O14529 1486 aa8.91□□□□□ -0.98
RN7SL356P-201ENST00000582228 KIF21BO75037 1637 aa8.91□□□□□ -0.98
RN7SL356P-201ENST00000582228 CUL7Q14999 1698 aa8.89□□□□□ -0.99
RN7SL356P-201ENST00000582228 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
RN7SL356P-201ENST00000582228 RAD54L2Q9Y4B4 1467 aa8.89□□□□□ -0.99
RN7SL356P-201ENST00000582228 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
RN7SL356P-201ENST00000582228 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
RN7SL356P-201ENST00000582228 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
RN7SL356P-201ENST00000582228 GAPVD1Q14C86 1478 aa8.85□□□□□ -0.99
RN7SL356P-201ENST00000582228 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
RN7SL356P-201ENST00000582228 CSRNP3Q8WYN3 585 aa8.84□□□□□ -0.99
RN7SL356P-201ENST00000582228 GOLGA3Q08378 1498 aa8.83□□□□□ -1
RN7SL356P-201ENST00000582228 GRIN2BQ13224 1484 aa8.83□□□□□ -1
RN7SL356P-201ENST00000582228 IGF1RP08069 1367 aa8.81□□□□□ -1
RN7SL356P-201ENST00000582228 ADAMTS12P58397 1594 aa8.81□□□□□ -1
RN7SL356P-201ENST00000582228 MAGI1Q96QZ7 1491 aaPredicted RBP8.8□□□□□ -1
RN7SL356P-201ENST00000582228 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
RN7SL356P-201ENST00000582228 RAPGEF2Q9Y4G8 1499 aa8.79□□□□□ -1
RN7SL356P-201ENST00000582228 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
RN7SL356P-201ENST00000582228 FAM9AQ8IZU1 332 aaPredicted RBP8.78□□□□□ -1
RN7SL356P-201ENST00000582228 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -1
RN7SL356P-201ENST00000582228 CARMIL1Q5VZK9 1371 aa8.77□□□□□ -1.01
RN7SL356P-201ENST00000582228 CTTNBP2Q8WZ74 1663 aa8.77□□□□□ -1.01
RN7SL356P-201ENST00000582228 FHAD1B1AJZ9 1412 aa8.77□□□□□ -1.01
RN7SL356P-201ENST00000582228 TNIKQ9UKE5 1360 aa8.76□□□□□ -1.01
RN7SL356P-201ENST00000582228 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms