RNA–Protein interactions for RNA: ENST00000582174.5

FLOT2-208, Transcript of flotillin 2, humanhuman

TSL 3

Gene FLOT2, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT2-208ENST00000582174 NISCHQ9Y2I1 1504 aa47.43■■■■■ 5.18
FLOT2-208ENST00000582174 CCDC180Q9P1Z9 1646 aa42.02■■■■■ 4.32
FLOT2-208ENST00000582174 ABCC9O60706 1549 aa40.94■■■■■ 4.14
FLOT2-208ENST00000582174 DCAF8L2P0C7V8 631 aa39.75■■■■□ 3.95
FLOT2-208ENST00000582174 ZCCHC6Q5VYS8 1495 aaKnown RBP39.53■■■■□ 3.92
FLOT2-208ENST00000582174 NACADO15069 1562 aa39.52■■■■□ 3.92
FLOT2-208ENST00000582174 RB1CC1Q8TDY2 1594 aa39.52■■■■□ 3.92
FLOT2-208ENST00000582174 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
FLOT2-208ENST00000582174 DCAF1Q9Y4B6 1507 aa39.26■■■■□ 3.88
FLOT2-208ENST00000582174 UNC13AQ9UPW8 1703 aa38.41■■■■□ 3.74
FLOT2-208ENST00000582174 SCRIBQ14160 1630 aa38.38■■■■□ 3.73
FLOT2-208ENST00000582174 PABPN1Q86U42 306 aaKnown RBP eCLIP38.35■■■■□ 3.73
FLOT2-208ENST00000582174 BICRAQ9NZM4 1560 aa38.16■■■■□ 3.7
FLOT2-208ENST00000582174 SHROOM4Q9ULL8 1493 aa37.94■■■■□ 3.66
FLOT2-208ENST00000582174 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
FLOT2-208ENST00000582174 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
FLOT2-208ENST00000582174 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
FLOT2-208ENST00000582174 CECR2Q9BXF3 1484 aa36.88■■■■□ 3.49
FLOT2-208ENST00000582174 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
FLOT2-208ENST00000582174 SMARCA4P51532 1647 aa36.72■■■■□ 3.47
FLOT2-208ENST00000582174 SMARCA2P51531 1590 aa36.52■■■■□ 3.44
FLOT2-208ENST00000582174 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
FLOT2-208ENST00000582174 ATAD2BQ9ULI0 1458 aa36.5■■■■□ 3.43
FLOT2-208ENST00000582174 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
FLOT2-208ENST00000582174 PEG3Q9GZU2 1588 aa36.35■■■■□ 3.41
FLOT2-208ENST00000582174 HMGXB3Q12766 1538 aa36.28■■■■□ 3.4
FLOT2-208ENST00000582174 BAZ1BQ9UIG0 1483 aaKnown RBP36.27■■■■□ 3.4
FLOT2-208ENST00000582174 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
FLOT2-208ENST00000582174 WIZO95785 1651 aa36.12■■■■□ 3.37
FLOT2-208ENST00000582174 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
FLOT2-208ENST00000582174 SUPT5HO00267 1087 aaKnown RBP35.65■■■■□ 3.3
FLOT2-208ENST00000582174 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
FLOT2-208ENST00000582174 CADPSQ9ULU8 1353 aa35.45■■■■□ 3.27
FLOT2-208ENST00000582174 NESP48681 1621 aa35.44■■■■□ 3.26
FLOT2-208ENST00000582174 CCDC88BA6NC98 1476 aa35.4■■■■□ 3.26
FLOT2-208ENST00000582174 ERCC6Q03468 1493 aa35.37■■■■□ 3.25
FLOT2-208ENST00000582174 PDS5BQ9NTI5 1447 aa35.31■■■■□ 3.24
FLOT2-208ENST00000582174 CFTRP13569 1480 aa35.25■■■■□ 3.23
FLOT2-208ENST00000582174 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
FLOT2-208ENST00000582174 KIF21AQ7Z4S6 1674 aa34.99■■■■□ 3.19
FLOT2-208ENST00000582174 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
FLOT2-208ENST00000582174 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
FLOT2-208ENST00000582174 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
FLOT2-208ENST00000582174 CUX2O14529 1486 aa34.84■■■■□ 3.17
FLOT2-208ENST00000582174 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
FLOT2-208ENST00000582174 WDR62O43379 1518 aa34.67■■■■□ 3.14
FLOT2-208ENST00000582174 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
FLOT2-208ENST00000582174 URB2Q14146 1524 aaKnown RBP34.58■■■■□ 3.13
FLOT2-208ENST00000582174 TOPBP1Q92547 1522 aa34.45■■■■□ 3.11
FLOT2-208ENST00000582174 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.1
FLOT2-208ENST00000582174 CUX1P39880 1505 aa34.25■■■■□ 3.07
FLOT2-208ENST00000582174 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
FLOT2-208ENST00000582174 WRNQ14191 1432 aaPredicted RBP eCLIP34.22■■■■□ 3.07
FLOT2-208ENST00000582174 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
FLOT2-208ENST00000582174 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
FLOT2-208ENST00000582174 SOGA1O94964 1423 aa34.13■■■■□ 3.05
FLOT2-208ENST00000582174 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
FLOT2-208ENST00000582174 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
FLOT2-208ENST00000582174 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.03
FLOT2-208ENST00000582174 SYNJ1O43426 1573 aa34■■■■□ 3.03
FLOT2-208ENST00000582174 TARBP1Q13395 1621 aaKnown RBP34■■■■□ 3.03
FLOT2-208ENST00000582174 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
FLOT2-208ENST00000582174 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
FLOT2-208ENST00000582174 AQRO60306 1485 aaKnown RBP eCLIP33.87■■■■□ 3.011e-6■■■■□ 19.9
FLOT2-208ENST00000582174 EIF4G3O43432 1585 aaKnown RBP33.84■■■■□ 3.01
FLOT2-208ENST00000582174 WDR97A6NE52 1622 aa33.83■■■■□ 3.01
FLOT2-208ENST00000582174 ABCA10Q8WWZ4 1543 aa33.83■■■■□ 3.01
FLOT2-208ENST00000582174 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
FLOT2-208ENST00000582174 TRIM41Q8WV44 630 aa33.71■■■□□ 2.99
FLOT2-208ENST00000582174 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
FLOT2-208ENST00000582174 ABCA5Q8WWZ7 1642 aa33.6■■■□□ 2.97
FLOT2-208ENST00000582174 FBLN2P98095 1184 aa33.57■■■□□ 2.96
FLOT2-208ENST00000582174 OSCARQ8IYS5 282 aa33.56■■■□□ 2.96
FLOT2-208ENST00000582174 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
FLOT2-208ENST00000582174 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
FLOT2-208ENST00000582174 KIF27Q86VH2 1401 aa33.53■■■□□ 2.96
FLOT2-208ENST00000582174 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
FLOT2-208ENST00000582174 DNAJC5Q9H3Z4 198 aa33.51■■■□□ 2.95
FLOT2-208ENST00000582174 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
FLOT2-208ENST00000582174 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
FLOT2-208ENST00000582174 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
FLOT2-208ENST00000582174 FHAD1B1AJZ9 1412 aa33.35■■■□□ 2.93
FLOT2-208ENST00000582174 CHIC1Q5VXU3 224 aa33.34■■■□□ 2.93
FLOT2-208ENST00000582174 CHD1O14646 1710 aa33.33■■■□□ 2.93
FLOT2-208ENST00000582174 IGF1RP08069 1367 aa33.31■■■□□ 2.92
FLOT2-208ENST00000582174 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
FLOT2-208ENST00000582174 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
FLOT2-208ENST00000582174 CUL7Q14999 1698 aa33.18■■■□□ 2.9
FLOT2-208ENST00000582174 CARMIL1Q5VZK9 1371 aa33.16■■■□□ 2.9
FLOT2-208ENST00000582174 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
FLOT2-208ENST00000582174 EEA1Q15075 1411 aa33.08■■■□□ 2.89
FLOT2-208ENST00000582174 NUP160Q12769 1436 aa33.02■■■□□ 2.88
FLOT2-208ENST00000582174 CSRNP3Q8WYN3 585 aa33.01■■■□□ 2.87
FLOT2-208ENST00000582174 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
FLOT2-208ENST00000582174 RAPGEF2Q9Y4G8 1499 aa32.97■■■□□ 2.87
FLOT2-208ENST00000582174 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
FLOT2-208ENST00000582174 FAM9AQ8IZU1 332 aaPredicted RBP32.95■■■□□ 2.87
FLOT2-208ENST00000582174 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
FLOT2-208ENST00000582174 PRXQ9BXM0 1461 aa32.86■■■□□ 2.85
FLOT2-208ENST00000582174 KIAA0586Q9BVV6 1533 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms