RNA–Protein interactions for RNA: ENST00000582139.1

RBFOX3-207, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 3

Gene RBFOX3, Length 154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-207ENST00000582139 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
RBFOX3-207ENST00000582139 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
RBFOX3-207ENST00000582139 ABCC9O60706 1549 aa16.58■□□□□ 0.24
RBFOX3-207ENST00000582139 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
RBFOX3-207ENST00000582139 NACADO15069 1562 aa16.04■□□□□ 0.16
RBFOX3-207ENST00000582139 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
RBFOX3-207ENST00000582139 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
RBFOX3-207ENST00000582139 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
RBFOX3-207ENST00000582139 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
RBFOX3-207ENST00000582139 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
RBFOX3-207ENST00000582139 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
RBFOX3-207ENST00000582139 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
RBFOX3-207ENST00000582139 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
RBFOX3-207ENST00000582139 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
RBFOX3-207ENST00000582139 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
RBFOX3-207ENST00000582139 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
RBFOX3-207ENST00000582139 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
RBFOX3-207ENST00000582139 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
RBFOX3-207ENST00000582139 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
RBFOX3-207ENST00000582139 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
RBFOX3-207ENST00000582139 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
RBFOX3-207ENST00000582139 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
RBFOX3-207ENST00000582139 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
RBFOX3-207ENST00000582139 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
RBFOX3-207ENST00000582139 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
RBFOX3-207ENST00000582139 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
RBFOX3-207ENST00000582139 WIZO95785 1651 aa14.74□□□□□ -0.05
RBFOX3-207ENST00000582139 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
RBFOX3-207ENST00000582139 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
RBFOX3-207ENST00000582139 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
RBFOX3-207ENST00000582139 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
RBFOX3-207ENST00000582139 NESP48681 1621 aa14.4□□□□□ -0.1
RBFOX3-207ENST00000582139 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
RBFOX3-207ENST00000582139 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
RBFOX3-207ENST00000582139 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
RBFOX3-207ENST00000582139 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
RBFOX3-207ENST00000582139 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
RBFOX3-207ENST00000582139 CFTRP13569 1480 aa14.29□□□□□ -0.12
RBFOX3-207ENST00000582139 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
RBFOX3-207ENST00000582139 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
RBFOX3-207ENST00000582139 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
RBFOX3-207ENST00000582139 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
RBFOX3-207ENST00000582139 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
RBFOX3-207ENST00000582139 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
RBFOX3-207ENST00000582139 WDR62O43379 1518 aa14.11□□□□□ -0.15
RBFOX3-207ENST00000582139 CUX2O14529 1486 aa14.09□□□□□ -0.15
RBFOX3-207ENST00000582139 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
RBFOX3-207ENST00000582139 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
RBFOX3-207ENST00000582139 TOPBP1Q92547 1522 aa14□□□□□ -0.17
RBFOX3-207ENST00000582139 CUX1P39880 1505 aa13.96□□□□□ -0.17
RBFOX3-207ENST00000582139 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
RBFOX3-207ENST00000582139 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
RBFOX3-207ENST00000582139 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
RBFOX3-207ENST00000582139 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
RBFOX3-207ENST00000582139 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
RBFOX3-207ENST00000582139 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
RBFOX3-207ENST00000582139 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
RBFOX3-207ENST00000582139 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
RBFOX3-207ENST00000582139 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
RBFOX3-207ENST00000582139 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
RBFOX3-207ENST00000582139 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
RBFOX3-207ENST00000582139 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
RBFOX3-207ENST00000582139 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
RBFOX3-207ENST00000582139 SOGA1O94964 1423 aa13.76□□□□□ -0.21
RBFOX3-207ENST00000582139 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
RBFOX3-207ENST00000582139 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
RBFOX3-207ENST00000582139 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
RBFOX3-207ENST00000582139 AQRO60306 1485 aaKnown RBP eCLIP13.69□□□□□ -0.22
RBFOX3-207ENST00000582139 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
RBFOX3-207ENST00000582139 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
RBFOX3-207ENST00000582139 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
RBFOX3-207ENST00000582139 CHD1O14646 1710 aa13.63□□□□□ -0.23
RBFOX3-207ENST00000582139 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
RBFOX3-207ENST00000582139 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
RBFOX3-207ENST00000582139 MAGI1Q96QZ7 1491 aaPredicted RBP13.6□□□□□ -0.23
RBFOX3-207ENST00000582139 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
RBFOX3-207ENST00000582139 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
RBFOX3-207ENST00000582139 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
RBFOX3-207ENST00000582139 CUL7Q14999 1698 aa13.53□□□□□ -0.24
RBFOX3-207ENST00000582139 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
RBFOX3-207ENST00000582139 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
RBFOX3-207ENST00000582139 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
RBFOX3-207ENST00000582139 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
RBFOX3-207ENST00000582139 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
RBFOX3-207ENST00000582139 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.25
RBFOX3-207ENST00000582139 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
RBFOX3-207ENST00000582139 IGF1RP08069 1367 aa13.45□□□□□ -0.26
RBFOX3-207ENST00000582139 FBLN2P98095 1184 aa13.43□□□□□ -0.26
RBFOX3-207ENST00000582139 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
RBFOX3-207ENST00000582139 NUP160Q12769 1436 aa13.4□□□□□ -0.26
RBFOX3-207ENST00000582139 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
RBFOX3-207ENST00000582139 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
RBFOX3-207ENST00000582139 EEA1Q15075 1411 aa13.38□□□□□ -0.27
RBFOX3-207ENST00000582139 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
RBFOX3-207ENST00000582139 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
RBFOX3-207ENST00000582139 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
RBFOX3-207ENST00000582139 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
RBFOX3-207ENST00000582139 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
RBFOX3-207ENST00000582139 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
RBFOX3-207ENST00000582139 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms