RNA–Protein interactions for RNA: ENST00000582056.5

ACADVL-227, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-227ENST00000582056 NISCHQ9Y2I1 1504 aa49.19■■■■■ 5.47
ACADVL-227ENST00000582056 CCDC180Q9P1Z9 1646 aa44.04■■■■■ 4.64
ACADVL-227ENST00000582056 ABCC9O60706 1549 aa43.05■■■■■ 4.48
ACADVL-227ENST00000582056 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
ACADVL-227ENST00000582056 NACADO15069 1562 aa41.36■■■■■ 4.21
ACADVL-227ENST00000582056 MYO15BQ96JP2 1530 aa41.08■■■■■ 4.17
ACADVL-227ENST00000582056 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
ACADVL-227ENST00000582056 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
ACADVL-227ENST00000582056 DCAF1Q9Y4B6 1507 aa40.8■■■■■ 4.12
ACADVL-227ENST00000582056 UNC13AQ9UPW8 1703 aa40.66■■■■■ 4.1
ACADVL-227ENST00000582056 BICRAQ9NZM4 1560 aa40.23■■■■■ 4.03
ACADVL-227ENST00000582056 PABPN1Q86U42 306 aaKnown RBP eCLIP40.04■■■■■ 41e-8■■■■■ 33.4
ACADVL-227ENST00000582056 SCRIBQ14160 1630 aa39.97■■■■□ 3.99
ACADVL-227ENST00000582056 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
ACADVL-227ENST00000582056 DNAJC5BQ9UF47 199 aa39.66■■■■□ 3.94
ACADVL-227ENST00000582056 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
ACADVL-227ENST00000582056 CC2D2AQ9P2K1 1620 aa39.05■■■■□ 3.84
ACADVL-227ENST00000582056 CECR2Q9BXF3 1484 aa38.74■■■■□ 3.79
ACADVL-227ENST00000582056 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
ACADVL-227ENST00000582056 BAZ1AQ9NRL2 1556 aaPredicted RBP38.19■■■■□ 3.7
ACADVL-227ENST00000582056 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
ACADVL-227ENST00000582056 SMARCA2P51531 1590 aa38.06■■■■□ 3.68
ACADVL-227ENST00000582056 ATAD2BQ9ULI0 1458 aa38.06■■■■□ 3.68
ACADVL-227ENST00000582056 HMGXB3Q12766 1538 aa37.98■■■■□ 3.67
ACADVL-227ENST00000582056 PEG3Q9GZU2 1588 aa37.97■■■■□ 3.67
ACADVL-227ENST00000582056 MROH2BQ7Z745 1585 aa37.88■■■■□ 3.65
ACADVL-227ENST00000582056 BAZ1BQ9UIG0 1483 aaKnown RBP37.72■■■■□ 3.63
ACADVL-227ENST00000582056 WIZO95785 1651 aa37.5■■■■□ 3.59
ACADVL-227ENST00000582056 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
ACADVL-227ENST00000582056 LAMC3Q9Y6N6 1575 aa37.21■■■■□ 3.55
ACADVL-227ENST00000582056 NESP48681 1621 aa37.2■■■■□ 3.55
ACADVL-227ENST00000582056 ERCC6Q03468 1493 aa37.13■■■■□ 3.53
ACADVL-227ENST00000582056 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
ACADVL-227ENST00000582056 CUX2O14529 1486 aa36.94■■■■□ 3.5
ACADVL-227ENST00000582056 KIF21AQ7Z4S6 1674 aa36.92■■■■□ 3.5
ACADVL-227ENST00000582056 CADPSQ9ULU8 1353 aa36.91■■■■□ 3.5
ACADVL-227ENST00000582056 THOC2Q8NI27 1593 aaKnown RBP36.86■■■■□ 3.49
ACADVL-227ENST00000582056 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
ACADVL-227ENST00000582056 CFTRP13569 1480 aa36.7■■■■□ 3.47
ACADVL-227ENST00000582056 PRDM2Q13029 1718 aa36.65■■■■□ 3.46
ACADVL-227ENST00000582056 CCDC88BA6NC98 1476 aa36.57■■■■□ 3.45
ACADVL-227ENST00000582056 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
ACADVL-227ENST00000582056 CEP164Q9UPV0 1460 aa36.52■■■■□ 3.44
ACADVL-227ENST00000582056 FANCD2Q9BXW9 1451 aa36.51■■■■□ 3.44
ACADVL-227ENST00000582056 WDR62O43379 1518 aa36.49■■■■□ 3.43
ACADVL-227ENST00000582056 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
ACADVL-227ENST00000582056 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
ACADVL-227ENST00000582056 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
ACADVL-227ENST00000582056 SUPT5HO00267 1087 aaKnown RBP35.94■■■■□ 3.34
ACADVL-227ENST00000582056 TOPBP1Q92547 1522 aa35.93■■■■□ 3.34
ACADVL-227ENST00000582056 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
ACADVL-227ENST00000582056 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
ACADVL-227ENST00000582056 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
ACADVL-227ENST00000582056 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
ACADVL-227ENST00000582056 ZNF608Q9ULD9 1512 aaPredicted RBP35.57■■■■□ 3.29
ACADVL-227ENST00000582056 CUX1P39880 1505 aa35.57■■■■□ 3.28
ACADVL-227ENST00000582056 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
ACADVL-227ENST00000582056 FGD5Q6ZNL6 1462 aa35.47■■■■□ 3.27
ACADVL-227ENST00000582056 WDR97A6NE52 1622 aa35.42■■■■□ 3.26
ACADVL-227ENST00000582056 RAD54L2Q9Y4B4 1467 aa35.37■■■■□ 3.25
ACADVL-227ENST00000582056 SOGA1O94964 1423 aa35.37■■■■□ 3.25
ACADVL-227ENST00000582056 BIVM-ERCC5R4GMW8 1640 aa35.31■■■■□ 3.24
ACADVL-227ENST00000582056 AQRO60306 1485 aaKnown RBP eCLIP35.29■■■■□ 3.243e-8■■■■□ 24.7
ACADVL-227ENST00000582056 TOP2BQ02880 1626 aa35.26■■■■□ 3.24
ACADVL-227ENST00000582056 SYNJ1O43426 1573 aa35.2■■■■□ 3.23
ACADVL-227ENST00000582056 CHD1O14646 1710 aa35.2■■■■□ 3.23
ACADVL-227ENST00000582056 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
ACADVL-227ENST00000582056 OSCARQ8IYS5 282 aa35.18■■■■□ 3.22
ACADVL-227ENST00000582056 TDRD9Q8NDG6 1382 aaKnown RBP35.16■■■■□ 3.22
ACADVL-227ENST00000582056 ABCA10Q8WWZ4 1543 aa35.15■■■■□ 3.22
ACADVL-227ENST00000582056 PBRM1Q86U86 1689 aa35.12■■■■□ 3.21
ACADVL-227ENST00000582056 ABCA5Q8WWZ7 1642 aa35.11■■■■□ 3.21
ACADVL-227ENST00000582056 GRIN2BQ13224 1484 aa35.05■■■■□ 3.2
ACADVL-227ENST00000582056 MAGI1Q96QZ7 1491 aaPredicted RBP35.04■■■■□ 3.2
ACADVL-227ENST00000582056 SNAPC4Q5SXM2 1469 aa35.03■■■■□ 3.2
ACADVL-227ENST00000582056 GAPVD1Q14C86 1478 aa35.01■■■■□ 3.19
ACADVL-227ENST00000582056 SYNJ2O15056 1496 aa34.88■■■■□ 3.17
ACADVL-227ENST00000582056 RIMBP3CA6NJZ7 1639 aa34.84■■■■□ 3.17
ACADVL-227ENST00000582056 RIMBP3BA6NNM3 1639 aa34.84■■■■□ 3.17
ACADVL-227ENST00000582056 RIMBP3Q9UFD9 1639 aa34.84■■■■□ 3.17
ACADVL-227ENST00000582056 FBLN2P98095 1184 aa34.78■■■■□ 3.16
ACADVL-227ENST00000582056 ARHGEF11O15085 1522 aa34.77■■■■□ 3.16
ACADVL-227ENST00000582056 CLASP1Q7Z460 1538 aa34.77■■■■□ 3.16
ACADVL-227ENST00000582056 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
ACADVL-227ENST00000582056 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
ACADVL-227ENST00000582056 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
ACADVL-227ENST00000582056 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
ACADVL-227ENST00000582056 FHAD1B1AJZ9 1412 aa34.59■■■■□ 3.13
ACADVL-227ENST00000582056 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
ACADVL-227ENST00000582056 CEP170Q5SW79 1584 aa34.49■■■■□ 3.11
ACADVL-227ENST00000582056 NUP160Q12769 1436 aa34.49■■■■□ 3.11
ACADVL-227ENST00000582056 KIF27Q86VH2 1401 aa34.47■■■■□ 3.11
ACADVL-227ENST00000582056 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
ACADVL-227ENST00000582056 CUL7Q14999 1698 aa34.44■■■■□ 3.1
ACADVL-227ENST00000582056 SHROOM2Q13796 1616 aa34.37■■■■□ 3.09
ACADVL-227ENST00000582056 IGF1RP08069 1367 aa34.32■■■■□ 3.08
ACADVL-227ENST00000582056 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
ACADVL-227ENST00000582056 CYB5RLQ6IPT4 315 aa34.26■■■■□ 3.08
ACADVL-227ENST00000582056 ERCC6L2Q5T890 1561 aa34.19■■■■□ 3.06
ACADVL-227ENST00000582056 CARMIL1Q5VZK9 1371 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms