RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
CDK5RAP3-222ENST00000581708 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
CDK5RAP3-222ENST00000581708 ABCC9O60706 1549 aa27.21■■□□□ 1.95
CDK5RAP3-222ENST00000581708 RB1CC1Q8TDY2 1594 aa26.19■■□□□ 1.78
CDK5RAP3-222ENST00000581708 NACADO15069 1562 aa26.12■■□□□ 1.77
CDK5RAP3-222ENST00000581708 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
CDK5RAP3-222ENST00000581708 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
CDK5RAP3-222ENST00000581708 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
CDK5RAP3-222ENST00000581708 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
CDK5RAP3-222ENST00000581708 UNC13AQ9UPW8 1703 aa25.49■■□□□ 1.67
CDK5RAP3-222ENST00000581708 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
CDK5RAP3-222ENST00000581708 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
CDK5RAP3-222ENST00000581708 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
CDK5RAP3-222ENST00000581708 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
CDK5RAP3-222ENST00000581708 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
CDK5RAP3-222ENST00000581708 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
CDK5RAP3-222ENST00000581708 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
CDK5RAP3-222ENST00000581708 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
CDK5RAP3-222ENST00000581708 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
CDK5RAP3-222ENST00000581708 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
CDK5RAP3-222ENST00000581708 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
CDK5RAP3-222ENST00000581708 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
CDK5RAP3-222ENST00000581708 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
CDK5RAP3-222ENST00000581708 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
CDK5RAP3-222ENST00000581708 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
CDK5RAP3-222ENST00000581708 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
CDK5RAP3-222ENST00000581708 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
CDK5RAP3-222ENST00000581708 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
CDK5RAP3-222ENST00000581708 WIZO95785 1651 aa23.53■■□□□ 1.36
CDK5RAP3-222ENST00000581708 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
CDK5RAP3-222ENST00000581708 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
CDK5RAP3-222ENST00000581708 NESP48681 1621 aa23.46■■□□□ 1.35
CDK5RAP3-222ENST00000581708 CUX2O14529 1486 aa23.44■■□□□ 1.34
CDK5RAP3-222ENST00000581708 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
CDK5RAP3-222ENST00000581708 PDS5BQ9NTI5 1447 aa23.35■■□□□ 1.33
CDK5RAP3-222ENST00000581708 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
CDK5RAP3-222ENST00000581708 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
CDK5RAP3-222ENST00000581708 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
CDK5RAP3-222ENST00000581708 CFTRP13569 1480 aa23.17■■□□□ 1.3
CDK5RAP3-222ENST00000581708 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
CDK5RAP3-222ENST00000581708 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
CDK5RAP3-222ENST00000581708 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
CDK5RAP3-222ENST00000581708 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
CDK5RAP3-222ENST00000581708 WDR62O43379 1518 aa23.03■■□□□ 1.28
CDK5RAP3-222ENST00000581708 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
CDK5RAP3-222ENST00000581708 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
CDK5RAP3-222ENST00000581708 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
CDK5RAP3-222ENST00000581708 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
CDK5RAP3-222ENST00000581708 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
CDK5RAP3-222ENST00000581708 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
CDK5RAP3-222ENST00000581708 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
CDK5RAP3-222ENST00000581708 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
CDK5RAP3-222ENST00000581708 POLA1P09884 1462 aaPredicted RBP22.44■■□□□ 1.18
CDK5RAP3-222ENST00000581708 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
CDK5RAP3-222ENST00000581708 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
CDK5RAP3-222ENST00000581708 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
CDK5RAP3-222ENST00000581708 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP3-222ENST00000581708 CUX1P39880 1505 aa22.37■■□□□ 1.17
CDK5RAP3-222ENST00000581708 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
CDK5RAP3-222ENST00000581708 SOGA1O94964 1423 aa22.36■■□□□ 1.17
CDK5RAP3-222ENST00000581708 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
CDK5RAP3-222ENST00000581708 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.162e-7■■■■□ 24.7
CDK5RAP3-222ENST00000581708 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
CDK5RAP3-222ENST00000581708 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
CDK5RAP3-222ENST00000581708 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
CDK5RAP3-222ENST00000581708 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
CDK5RAP3-222ENST00000581708 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
CDK5RAP3-222ENST00000581708 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
CDK5RAP3-222ENST00000581708 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
CDK5RAP3-222ENST00000581708 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
CDK5RAP3-222ENST00000581708 CHD1O14646 1710 aa22.11■■□□□ 1.13
CDK5RAP3-222ENST00000581708 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
CDK5RAP3-222ENST00000581708 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
CDK5RAP3-222ENST00000581708 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
CDK5RAP3-222ENST00000581708 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
CDK5RAP3-222ENST00000581708 FBLN2P98095 1184 aa22.06■■□□□ 1.12
CDK5RAP3-222ENST00000581708 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
CDK5RAP3-222ENST00000581708 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
CDK5RAP3-222ENST00000581708 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-222ENST00000581708 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
CDK5RAP3-222ENST00000581708 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
CDK5RAP3-222ENST00000581708 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
CDK5RAP3-222ENST00000581708 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
CDK5RAP3-222ENST00000581708 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
CDK5RAP3-222ENST00000581708 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CDK5RAP3-222ENST00000581708 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
CDK5RAP3-222ENST00000581708 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
CDK5RAP3-222ENST00000581708 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
CDK5RAP3-222ENST00000581708 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
CDK5RAP3-222ENST00000581708 NUP160Q12769 1436 aa21.79■■□□□ 1.08
CDK5RAP3-222ENST00000581708 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
CDK5RAP3-222ENST00000581708 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
CDK5RAP3-222ENST00000581708 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
CDK5RAP3-222ENST00000581708 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
CDK5RAP3-222ENST00000581708 IGF1RP08069 1367 aa21.67■■□□□ 1.06
CDK5RAP3-222ENST00000581708 CUL7Q14999 1698 aa21.66■■□□□ 1.06
CDK5RAP3-222ENST00000581708 SHROOM2Q13796 1616 aa21.64■■□□□ 1.05
CDK5RAP3-222ENST00000581708 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
CDK5RAP3-222ENST00000581708 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
CDK5RAP3-222ENST00000581708 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms