RNA–Protein interactions for RNA: ENST00000581246.5

MSL1-208, Transcript of male specific lethal 1 homolog, humanhuman

TSL 4

Gene MSL1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-208ENST00000581246 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
MSL1-208ENST00000581246 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
MSL1-208ENST00000581246 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
MSL1-208ENST00000581246 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
MSL1-208ENST00000581246 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
MSL1-208ENST00000581246 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
MSL1-208ENST00000581246 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
MSL1-208ENST00000581246 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
MSL1-208ENST00000581246 ABCC9O60706 1549 aa19.66■□□□□ 0.74
MSL1-208ENST00000581246 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
MSL1-208ENST00000581246 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
MSL1-208ENST00000581246 NACADO15069 1562 aa19.36■□□□□ 0.69
MSL1-208ENST00000581246 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
MSL1-208ENST00000581246 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
MSL1-208ENST00000581246 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
MSL1-208ENST00000581246 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
MSL1-208ENST00000581246 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
MSL1-208ENST00000581246 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
MSL1-208ENST00000581246 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
MSL1-208ENST00000581246 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
MSL1-208ENST00000581246 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
MSL1-208ENST00000581246 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
MSL1-208ENST00000581246 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
MSL1-208ENST00000581246 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
MSL1-208ENST00000581246 FOXD1Q16676 465 aa18.27■□□□□ 0.52
MSL1-208ENST00000581246 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
MSL1-208ENST00000581246 WIZO95785 1651 aa18.18■□□□□ 0.5
MSL1-208ENST00000581246 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
MSL1-208ENST00000581246 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
MSL1-208ENST00000581246 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
MSL1-208ENST00000581246 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
MSL1-208ENST00000581246 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
MSL1-208ENST00000581246 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
MSL1-208ENST00000581246 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
MSL1-208ENST00000581246 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
MSL1-208ENST00000581246 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
MSL1-208ENST00000581246 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
MSL1-208ENST00000581246 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
MSL1-208ENST00000581246 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
MSL1-208ENST00000581246 ADRA2BP18089 450 aa17.49■□□□□ 0.39
MSL1-208ENST00000581246 CFTRP13569 1480 aa17.44■□□□□ 0.38
MSL1-208ENST00000581246 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
MSL1-208ENST00000581246 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
MSL1-208ENST00000581246 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
MSL1-208ENST00000581246 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
MSL1-208ENST00000581246 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
MSL1-208ENST00000581246 NESP48681 1621 aa17.26■□□□□ 0.35
MSL1-208ENST00000581246 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
MSL1-208ENST00000581246 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
MSL1-208ENST00000581246 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
MSL1-208ENST00000581246 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
MSL1-208ENST00000581246 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
MSL1-208ENST00000581246 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
MSL1-208ENST00000581246 CUX1P39880 1505 aa17.15■□□□□ 0.34
MSL1-208ENST00000581246 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
MSL1-208ENST00000581246 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
MSL1-208ENST00000581246 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
MSL1-208ENST00000581246 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
MSL1-208ENST00000581246 SOGA1O94964 1423 aa17.01■□□□□ 0.31
MSL1-208ENST00000581246 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
MSL1-208ENST00000581246 TOPBP1Q92547 1522 aa17■□□□□ 0.31
MSL1-208ENST00000581246 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
MSL1-208ENST00000581246 FAM9AQ8IZU1 332 aaPredicted RBP16.95■□□□□ 0.3
MSL1-208ENST00000581246 EEA1Q15075 1411 aa16.95■□□□□ 0.3
MSL1-208ENST00000581246 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
MSL1-208ENST00000581246 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
MSL1-208ENST00000581246 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
MSL1-208ENST00000581246 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
MSL1-208ENST00000581246 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
MSL1-208ENST00000581246 MSH5O43196 834 aa16.86■□□□□ 0.29
MSL1-208ENST00000581246 WDR62O43379 1518 aa16.85■□□□□ 0.29
MSL1-208ENST00000581246 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
MSL1-208ENST00000581246 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
MSL1-208ENST00000581246 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
MSL1-208ENST00000581246 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
MSL1-208ENST00000581246 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
MSL1-208ENST00000581246 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
MSL1-208ENST00000581246 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
MSL1-208ENST00000581246 CUX2O14529 1486 aa16.79■□□□□ 0.28
MSL1-208ENST00000581246 KIF21BO75037 1637 aa16.77■□□□□ 0.27
MSL1-208ENST00000581246 IGF1RP08069 1367 aa16.74■□□□□ 0.27
MSL1-208ENST00000581246 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
MSL1-208ENST00000581246 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
MSL1-208ENST00000581246 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
MSL1-208ENST00000581246 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
MSL1-208ENST00000581246 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
MSL1-208ENST00000581246 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
MSL1-208ENST00000581246 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
MSL1-208ENST00000581246 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
MSL1-208ENST00000581246 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
MSL1-208ENST00000581246 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
MSL1-208ENST00000581246 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
MSL1-208ENST00000581246 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
MSL1-208ENST00000581246 CUL7Q14999 1698 aa16.59■□□□□ 0.25
MSL1-208ENST00000581246 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
MSL1-208ENST00000581246 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.257e-9■■■■□ 22.9
MSL1-208ENST00000581246 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
MSL1-208ENST00000581246 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
MSL1-208ENST00000581246 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
MSL1-208ENST00000581246 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms