RNA–Protein interactions for RNA: ENST00000581187.1

MIR4253-201, Transcript of microRNA 4253, humanhuman

BASIC

Gene MIR4253, Length 68 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4253-201ENST00000581187 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
MIR4253-201ENST00000581187 ABCC9O60706 1549 aa21.42■■□□□ 1.02
MIR4253-201ENST00000581187 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
MIR4253-201ENST00000581187 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
MIR4253-201ENST00000581187 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
MIR4253-201ENST00000581187 NACADO15069 1562 aa20.29■□□□□ 0.84
MIR4253-201ENST00000581187 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
MIR4253-201ENST00000581187 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
MIR4253-201ENST00000581187 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
MIR4253-201ENST00000581187 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
MIR4253-201ENST00000581187 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
MIR4253-201ENST00000581187 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
MIR4253-201ENST00000581187 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
MIR4253-201ENST00000581187 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
MIR4253-201ENST00000581187 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
MIR4253-201ENST00000581187 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
MIR4253-201ENST00000581187 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
MIR4253-201ENST00000581187 EIF4G1Q04637 1599 aaKnown RBP19.29■□□□□ 0.68
MIR4253-201ENST00000581187 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
MIR4253-201ENST00000581187 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
MIR4253-201ENST00000581187 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
MIR4253-201ENST00000581187 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
MIR4253-201ENST00000581187 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
MIR4253-201ENST00000581187 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
MIR4253-201ENST00000581187 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
MIR4253-201ENST00000581187 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
MIR4253-201ENST00000581187 CUX2O14529 1486 aa18.53■□□□□ 0.56
MIR4253-201ENST00000581187 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
MIR4253-201ENST00000581187 PEG3Q9GZU2 1588 aa18.41■□□□□ 0.54
MIR4253-201ENST00000581187 NESP48681 1621 aa18.35■□□□□ 0.53
MIR4253-201ENST00000581187 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
MIR4253-201ENST00000581187 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
MIR4253-201ENST00000581187 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
MIR4253-201ENST00000581187 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
MIR4253-201ENST00000581187 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
MIR4253-201ENST00000581187 WIZO95785 1651 aa18.09■□□□□ 0.49
MIR4253-201ENST00000581187 KIF21AQ7Z4S6 1674 aa18.08■□□□□ 0.48
MIR4253-201ENST00000581187 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
MIR4253-201ENST00000581187 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
MIR4253-201ENST00000581187 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
MIR4253-201ENST00000581187 WDR62O43379 1518 aa17.95■□□□□ 0.46
MIR4253-201ENST00000581187 CFTRP13569 1480 aa17.94■□□□□ 0.46
MIR4253-201ENST00000581187 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
MIR4253-201ENST00000581187 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
MIR4253-201ENST00000581187 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
MIR4253-201ENST00000581187 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
MIR4253-201ENST00000581187 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
MIR4253-201ENST00000581187 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
MIR4253-201ENST00000581187 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
MIR4253-201ENST00000581187 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
MIR4253-201ENST00000581187 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
MIR4253-201ENST00000581187 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
MIR4253-201ENST00000581187 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
MIR4253-201ENST00000581187 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
MIR4253-201ENST00000581187 FBLN2P98095 1184 aa17.41■□□□□ 0.38
MIR4253-201ENST00000581187 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
MIR4253-201ENST00000581187 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
MIR4253-201ENST00000581187 SOGA1O94964 1423 aa17.38■□□□□ 0.37
MIR4253-201ENST00000581187 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
MIR4253-201ENST00000581187 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
MIR4253-201ENST00000581187 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
MIR4253-201ENST00000581187 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
MIR4253-201ENST00000581187 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
MIR4253-201ENST00000581187 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
MIR4253-201ENST00000581187 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
MIR4253-201ENST00000581187 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
MIR4253-201ENST00000581187 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
MIR4253-201ENST00000581187 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
MIR4253-201ENST00000581187 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
MIR4253-201ENST00000581187 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
MIR4253-201ENST00000581187 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
MIR4253-201ENST00000581187 CHD1O14646 1710 aa17.26■□□□□ 0.35
MIR4253-201ENST00000581187 CUX1P39880 1505 aa17.22■□□□□ 0.35
MIR4253-201ENST00000581187 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
MIR4253-201ENST00000581187 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
MIR4253-201ENST00000581187 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
MIR4253-201ENST00000581187 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
MIR4253-201ENST00000581187 SYNJ1O43426 1573 aa17.16■□□□□ 0.34
MIR4253-201ENST00000581187 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
MIR4253-201ENST00000581187 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
MIR4253-201ENST00000581187 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
MIR4253-201ENST00000581187 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
MIR4253-201ENST00000581187 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
MIR4253-201ENST00000581187 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
MIR4253-201ENST00000581187 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
MIR4253-201ENST00000581187 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
MIR4253-201ENST00000581187 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
MIR4253-201ENST00000581187 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
MIR4253-201ENST00000581187 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
MIR4253-201ENST00000581187 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
MIR4253-201ENST00000581187 NUP160Q12769 1436 aa16.9■□□□□ 0.3
MIR4253-201ENST00000581187 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
MIR4253-201ENST00000581187 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
MIR4253-201ENST00000581187 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
MIR4253-201ENST00000581187 CEP170Q5SW79 1584 aa16.84■□□□□ 0.29
MIR4253-201ENST00000581187 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
MIR4253-201ENST00000581187 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
MIR4253-201ENST00000581187 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
MIR4253-201ENST00000581187 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
MIR4253-201ENST00000581187 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms