RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
NUP85-216ENST00000581104 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
NUP85-216ENST00000581104 ABCC9O60706 1549 aa19.1■□□□□ 0.65
NUP85-216ENST00000581104 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
NUP85-216ENST00000581104 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
NUP85-216ENST00000581104 NACADO15069 1562 aa18.52■□□□□ 0.56
NUP85-216ENST00000581104 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
NUP85-216ENST00000581104 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
NUP85-216ENST00000581104 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
NUP85-216ENST00000581104 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
NUP85-216ENST00000581104 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
NUP85-216ENST00000581104 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.466e-11■■■□□ 15.6
NUP85-216ENST00000581104 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
NUP85-216ENST00000581104 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
NUP85-216ENST00000581104 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
NUP85-216ENST00000581104 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
NUP85-216ENST00000581104 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
NUP85-216ENST00000581104 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
NUP85-216ENST00000581104 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
NUP85-216ENST00000581104 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.35
NUP85-216ENST00000581104 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
NUP85-216ENST00000581104 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
NUP85-216ENST00000581104 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
NUP85-216ENST00000581104 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
NUP85-216ENST00000581104 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
NUP85-216ENST00000581104 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
NUP85-216ENST00000581104 WIZO95785 1651 aa17.06■□□□□ 0.32
NUP85-216ENST00000581104 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
NUP85-216ENST00000581104 HMGXB3Q12766 1538 aa17.02■□□□□ 0.31
NUP85-216ENST00000581104 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
NUP85-216ENST00000581104 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
NUP85-216ENST00000581104 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
NUP85-216ENST00000581104 NESP48681 1621 aa16.6■□□□□ 0.25
NUP85-216ENST00000581104 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
NUP85-216ENST00000581104 LAMC3Q9Y6N6 1575 aa16.59■□□□□ 0.25
NUP85-216ENST00000581104 CFTRP13569 1480 aa16.54■□□□□ 0.24
NUP85-216ENST00000581104 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
NUP85-216ENST00000581104 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
NUP85-216ENST00000581104 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
NUP85-216ENST00000581104 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
NUP85-216ENST00000581104 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
NUP85-216ENST00000581104 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
NUP85-216ENST00000581104 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
NUP85-216ENST00000581104 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
NUP85-216ENST00000581104 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
NUP85-216ENST00000581104 WDR62O43379 1518 aa16.22■□□□□ 0.19
NUP85-216ENST00000581104 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
NUP85-216ENST00000581104 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
NUP85-216ENST00000581104 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
NUP85-216ENST00000581104 CUX2O14529 1486 aa16.17■□□□□ 0.18
NUP85-216ENST00000581104 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
NUP85-216ENST00000581104 CUX1P39880 1505 aa16.15■□□□□ 0.18
NUP85-216ENST00000581104 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
NUP85-216ENST00000581104 TOP2BQ02880 1626 aa16.08■□□□□ 0.17
NUP85-216ENST00000581104 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
NUP85-216ENST00000581104 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
NUP85-216ENST00000581104 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
NUP85-216ENST00000581104 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
NUP85-216ENST00000581104 SOGA1O94964 1423 aa16.01■□□□□ 0.15
NUP85-216ENST00000581104 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
NUP85-216ENST00000581104 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
NUP85-216ENST00000581104 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
NUP85-216ENST00000581104 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
NUP85-216ENST00000581104 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
NUP85-216ENST00000581104 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
NUP85-216ENST00000581104 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
NUP85-216ENST00000581104 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
NUP85-216ENST00000581104 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
NUP85-216ENST00000581104 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.131e-6■■■■□ 20.4
NUP85-216ENST00000581104 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
NUP85-216ENST00000581104 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
NUP85-216ENST00000581104 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
NUP85-216ENST00000581104 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
NUP85-216ENST00000581104 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
NUP85-216ENST00000581104 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
NUP85-216ENST00000581104 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
NUP85-216ENST00000581104 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
NUP85-216ENST00000581104 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
NUP85-216ENST00000581104 IGF1RP08069 1367 aa15.68■□□□□ 0.1
NUP85-216ENST00000581104 EEA1Q15075 1411 aa15.67■□□□□ 0.1
NUP85-216ENST00000581104 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
NUP85-216ENST00000581104 FBLN2P98095 1184 aa15.66■□□□□ 0.1
NUP85-216ENST00000581104 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
NUP85-216ENST00000581104 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
NUP85-216ENST00000581104 CUL7Q14999 1698 aa15.65■□□□□ 0.1
NUP85-216ENST00000581104 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
NUP85-216ENST00000581104 FAM9AQ8IZU1 332 aaPredicted RBP15.64■□□□□ 0.09
NUP85-216ENST00000581104 CHD1O14646 1710 aa15.63■□□□□ 0.09
NUP85-216ENST00000581104 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
NUP85-216ENST00000581104 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
NUP85-216ENST00000581104 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
NUP85-216ENST00000581104 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
NUP85-216ENST00000581104 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
NUP85-216ENST00000581104 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
NUP85-216ENST00000581104 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
NUP85-216ENST00000581104 NUP160Q12769 1436 aa15.49■□□□□ 0.07
NUP85-216ENST00000581104 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
NUP85-216ENST00000581104 KIF21BO75037 1637 aa15.48■□□□□ 0.07
NUP85-216ENST00000581104 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
NUP85-216ENST00000581104 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms