RNA–Protein interactions for RNA: ENST00000580835.2

RN7SL230P-201, Transcript of RNA, 7SL, cytoplasmic 230, pseudogene, humanhuman

BASIC

Gene RN7SL230P, Length 303 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL230P-201ENST00000580835 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
RN7SL230P-201ENST00000580835 ABCC9O60706 1549 aa14.65□□□□□ -0.06
RN7SL230P-201ENST00000580835 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
RN7SL230P-201ENST00000580835 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
RN7SL230P-201ENST00000580835 NACADO15069 1562 aa13.86□□□□□ -0.19
RN7SL230P-201ENST00000580835 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
RN7SL230P-201ENST00000580835 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
RN7SL230P-201ENST00000580835 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
RN7SL230P-201ENST00000580835 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
RN7SL230P-201ENST00000580835 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
RN7SL230P-201ENST00000580835 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
RN7SL230P-201ENST00000580835 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
RN7SL230P-201ENST00000580835 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
RN7SL230P-201ENST00000580835 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
RN7SL230P-201ENST00000580835 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
RN7SL230P-201ENST00000580835 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
RN7SL230P-201ENST00000580835 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
RN7SL230P-201ENST00000580835 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
RN7SL230P-201ENST00000580835 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
RN7SL230P-201ENST00000580835 CUX2O14529 1486 aa12.8□□□□□ -0.36
RN7SL230P-201ENST00000580835 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
RN7SL230P-201ENST00000580835 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
RN7SL230P-201ENST00000580835 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
RN7SL230P-201ENST00000580835 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
RN7SL230P-201ENST00000580835 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
RN7SL230P-201ENST00000580835 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
RN7SL230P-201ENST00000580835 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
RN7SL230P-201ENST00000580835 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
RN7SL230P-201ENST00000580835 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
RN7SL230P-201ENST00000580835 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
RN7SL230P-201ENST00000580835 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
RN7SL230P-201ENST00000580835 NESP48681 1621 aa12.48□□□□□ -0.41
RN7SL230P-201ENST00000580835 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
RN7SL230P-201ENST00000580835 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
RN7SL230P-201ENST00000580835 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
RN7SL230P-201ENST00000580835 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
RN7SL230P-201ENST00000580835 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
RN7SL230P-201ENST00000580835 WDR62O43379 1518 aa12.28□□□□□ -0.44
RN7SL230P-201ENST00000580835 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
RN7SL230P-201ENST00000580835 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
RN7SL230P-201ENST00000580835 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
RN7SL230P-201ENST00000580835 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
RN7SL230P-201ENST00000580835 WIZO95785 1651 aa12.19□□□□□ -0.46
RN7SL230P-201ENST00000580835 CFTRP13569 1480 aa12.18□□□□□ -0.46
RN7SL230P-201ENST00000580835 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
RN7SL230P-201ENST00000580835 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
RN7SL230P-201ENST00000580835 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
RN7SL230P-201ENST00000580835 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
RN7SL230P-201ENST00000580835 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
RN7SL230P-201ENST00000580835 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
RN7SL230P-201ENST00000580835 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
RN7SL230P-201ENST00000580835 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
RN7SL230P-201ENST00000580835 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
RN7SL230P-201ENST00000580835 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
RN7SL230P-201ENST00000580835 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
RN7SL230P-201ENST00000580835 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
RN7SL230P-201ENST00000580835 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
RN7SL230P-201ENST00000580835 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
RN7SL230P-201ENST00000580835 FBLN2P98095 1184 aa11.85□□□□□ -0.51
RN7SL230P-201ENST00000580835 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
RN7SL230P-201ENST00000580835 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
RN7SL230P-201ENST00000580835 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
RN7SL230P-201ENST00000580835 CHD1O14646 1710 aa11.8□□□□□ -0.52
RN7SL230P-201ENST00000580835 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
RN7SL230P-201ENST00000580835 SOGA1O94964 1423 aa11.78□□□□□ -0.52
RN7SL230P-201ENST00000580835 CHMP7Q8WUX9 453 aaPredicted RBP11.77□□□□□ -0.53
RN7SL230P-201ENST00000580835 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
RN7SL230P-201ENST00000580835 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
RN7SL230P-201ENST00000580835 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
RN7SL230P-201ENST00000580835 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
RN7SL230P-201ENST00000580835 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
RN7SL230P-201ENST00000580835 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
RN7SL230P-201ENST00000580835 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
RN7SL230P-201ENST00000580835 CUX1P39880 1505 aa11.62□□□□□ -0.55
RN7SL230P-201ENST00000580835 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
RN7SL230P-201ENST00000580835 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
RN7SL230P-201ENST00000580835 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
RN7SL230P-201ENST00000580835 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
RN7SL230P-201ENST00000580835 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
RN7SL230P-201ENST00000580835 FHAD1B1AJZ9 1412 aa11.51□□□□□ -0.57
RN7SL230P-201ENST00000580835 NUP160Q12769 1436 aa11.5□□□□□ -0.57
RN7SL230P-201ENST00000580835 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
RN7SL230P-201ENST00000580835 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
RN7SL230P-201ENST00000580835 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
RN7SL230P-201ENST00000580835 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
RN7SL230P-201ENST00000580835 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
RN7SL230P-201ENST00000580835 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
RN7SL230P-201ENST00000580835 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
RN7SL230P-201ENST00000580835 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
RN7SL230P-201ENST00000580835 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
RN7SL230P-201ENST00000580835 PRG4Q92954 1404 aaPredicted RBP11.41□□□□□ -0.58
RN7SL230P-201ENST00000580835 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms