RNA–Protein interactions for RNA: ENST00000580658.1

AC004147.1-201, humanhuman

TSL 3 BASIC

Gene AC004147.1, Length 299 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004147.1-201ENST00000580658 AEBP2Q6ZN18 517 aaPredicted RBP13.2□□□□□ -0.3
AC004147.1-201ENST00000580658 CHIC1Q5VXU3 224 aa12.42□□□□□ -0.42
AC004147.1-201ENST00000580658 SENP3Q9H4L4 574 aaPredicted RBP11.28□□□□□ -0.6
AC004147.1-201ENST00000580658 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
AC004147.1-201ENST00000580658 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
AC004147.1-201ENST00000580658 FOXD1Q16676 465 aa10.53□□□□□ -0.72
AC004147.1-201ENST00000580658 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
AC004147.1-201ENST00000580658 ABCC9O60706 1549 aa10.07□□□□□ -0.8
AC004147.1-201ENST00000580658 MSH5O43196 834 aa9.89□□□□□ -0.83
AC004147.1-201ENST00000580658 PLPPR3Q6T4P5 718 aa9.88□□□□□ -0.83
AC004147.1-201ENST00000580658 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
AC004147.1-201ENST00000580658 PIAS4Q8N2W9 510 aaPredicted RBP9.83□□□□□ -0.84
AC004147.1-201ENST00000580658 PPP6R1Q9UPN7 881 aa9.76□□□□□ -0.85
AC004147.1-201ENST00000580658 ADRA2BP18089 450 aa9.73□□□□□ -0.85
AC004147.1-201ENST00000580658 RB1CC1Q8TDY2 1594 aa9.61□□□□□ -0.87
AC004147.1-201ENST00000580658 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.87
AC004147.1-201ENST00000580658 NACADO15069 1562 aa9.53□□□□□ -0.88
AC004147.1-201ENST00000580658 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
AC004147.1-201ENST00000580658 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
AC004147.1-201ENST00000580658 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
AC004147.1-201ENST00000580658 SHROOM4Q9ULL8 1493 aa9.34□□□□□ -0.91
AC004147.1-201ENST00000580658 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
AC004147.1-201ENST00000580658 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
AC004147.1-201ENST00000580658 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
AC004147.1-201ENST00000580658 ZCCHC6Q5VYS8 1495 aaKnown RBP9.17□□□□□ -0.94
AC004147.1-201ENST00000580658 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
AC004147.1-201ENST00000580658 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
AC004147.1-201ENST00000580658 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
AC004147.1-201ENST00000580658 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
AC004147.1-201ENST00000580658 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
AC004147.1-201ENST00000580658 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
AC004147.1-201ENST00000580658 DMRT2Q9Y5R5 561 aa8.93□□□□□ -0.98
AC004147.1-201ENST00000580658 SCAF1Q9H7N4 1312 aaKnown RBP8.9□□□□□ -0.98
AC004147.1-201ENST00000580658 CUX2O14529 1486 aa8.89□□□□□ -0.99
AC004147.1-201ENST00000580658 NCAPD3P42695 1498 aa8.78□□□□□ -1
AC004147.1-201ENST00000580658 HMGXB3Q12766 1538 aa8.76□□□□□ -1.01
AC004147.1-201ENST00000580658 THOC2Q8NI27 1593 aaKnown RBP8.72□□□□□ -1.01
AC004147.1-201ENST00000580658 ATAD2BQ9ULI0 1458 aa8.7□□□□□ -1.02
AC004147.1-201ENST00000580658 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
AC004147.1-201ENST00000580658 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
AC004147.1-201ENST00000580658 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
AC004147.1-201ENST00000580658 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
AC004147.1-201ENST00000580658 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
AC004147.1-201ENST00000580658 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
AC004147.1-201ENST00000580658 NESP48681 1621 aa8.62□□□□□ -1.03
AC004147.1-201ENST00000580658 DCAF8L1A6NGE4 600 aa8.6□□□□□ -1.03
AC004147.1-201ENST00000580658 BAZ1AQ9NRL2 1556 aaPredicted RBP8.59□□□□□ -1.03
AC004147.1-201ENST00000580658 CACNB1Q02641 598 aaPredicted RBP8.58□□□□□ -1.04
AC004147.1-201ENST00000580658 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
AC004147.1-201ENST00000580658 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
AC004147.1-201ENST00000580658 HOXD11P31277 338 aaPredicted RBP8.54□□□□□ -1.04
AC004147.1-201ENST00000580658 WDR62O43379 1518 aa8.54□□□□□ -1.04
AC004147.1-201ENST00000580658 CNKSR2Q8WXI2 1034 aa8.51□□□□□ -1.05
AC004147.1-201ENST00000580658 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
AC004147.1-201ENST00000580658 MRC2Q9UBG0 1479 aa8.48□□□□□ -1.05
AC004147.1-201ENST00000580658 MROH2BQ7Z745 1585 aa8.47□□□□□ -1.05
AC004147.1-201ENST00000580658 RNF216Q9NWF9 866 aaPredicted RBP8.45□□□□□ -1.06
AC004147.1-201ENST00000580658 CADPSQ9ULU8 1353 aa8.44□□□□□ -1.06
AC004147.1-201ENST00000580658 RNF39Q9H2S5 420 aa8.43□□□□□ -1.06
AC004147.1-201ENST00000580658 CEP164Q9UPV0 1460 aa8.38□□□□□ -1.07
AC004147.1-201ENST00000580658 CFTRP13569 1480 aa8.37□□□□□ -1.07
AC004147.1-201ENST00000580658 FANCD2Q9BXW9 1451 aa8.35□□□□□ -1.07
AC004147.1-201ENST00000580658 WIZO95785 1651 aa8.34□□□□□ -1.07
AC004147.1-201ENST00000580658 PRDM2Q13029 1718 aa8.34□□□□□ -1.07
AC004147.1-201ENST00000580658 TRIM41Q8WV44 630 aa8.33□□□□□ -1.08
AC004147.1-201ENST00000580658 URB2Q14146 1524 aaKnown RBP8.33□□□□□ -1.08
AC004147.1-201ENST00000580658 RIMBP3CA6NJZ7 1639 aa8.32□□□□□ -1.08
AC004147.1-201ENST00000580658 RIMBP3BA6NNM3 1639 aa8.32□□□□□ -1.08
AC004147.1-201ENST00000580658 RIMBP3Q9UFD9 1639 aa8.32□□□□□ -1.08
AC004147.1-201ENST00000580658 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
AC004147.1-201ENST00000580658 C1QBPQ07021 282 aaKnown RBP8.29□□□□□ -1.08
AC004147.1-201ENST00000580658 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
AC004147.1-201ENST00000580658 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
AC004147.1-201ENST00000580658 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
AC004147.1-201ENST00000580658 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
AC004147.1-201ENST00000580658 EIF4G3O43432 1585 aaKnown RBP8.23□□□□□ -1.09
AC004147.1-201ENST00000580658 ZNF608Q9ULD9 1512 aaPredicted RBP8.22□□□□□ -1.09
AC004147.1-201ENST00000580658 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
AC004147.1-201ENST00000580658 TOPBP1Q92547 1522 aa8.19□□□□□ -1.1
AC004147.1-201ENST00000580658 TARBP1Q13395 1621 aaKnown RBP8.19□□□□□ -1.1
AC004147.1-201ENST00000580658 ARAP1Q96P48 1450 aa8.19□□□□□ -1.1
AC004147.1-201ENST00000580658 DNMBPQ6XZF7 1577 aa8.18□□□□□ -1.1
AC004147.1-201ENST00000580658 CHD1O14646 1710 aa8.17□□□□□ -1.1
AC004147.1-201ENST00000580658 NPM3O75607 178 aaKnown RBP8.17□□□□□ -1.1
AC004147.1-201ENST00000580658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.17□□□□□ -1.1
AC004147.1-201ENST00000580658 WDR97A6NE52 1622 aa8.17□□□□□ -1.1
AC004147.1-201ENST00000580658 ABCC8Q09428 1581 aa8.16□□□□□ -1.1
AC004147.1-201ENST00000580658 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
AC004147.1-201ENST00000580658 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
AC004147.1-201ENST00000580658 POLA1P09884 1462 aaPredicted RBP8.11□□□□□ -1.11
AC004147.1-201ENST00000580658 AQRO60306 1485 aaKnown RBP eCLIP8.06□□□□□ -1.12
AC004147.1-201ENST00000580658 MAGI1Q96QZ7 1491 aaPredicted RBP8.06□□□□□ -1.12
AC004147.1-201ENST00000580658 SYNJ1O43426 1573 aa8.05□□□□□ -1.12
AC004147.1-201ENST00000580658 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
AC004147.1-201ENST00000580658 CYB5RLQ6IPT4 315 aa8.02□□□□□ -1.13
AC004147.1-201ENST00000580658 SYNJ2O15056 1496 aa8.01□□□□□ -1.13
AC004147.1-201ENST00000580658 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
AC004147.1-201ENST00000580658 ABCA5Q8WWZ7 1642 aa8□□□□□ -1.13
AC004147.1-201ENST00000580658 PBRM1Q86U86 1689 aa8□□□□□ -1.13
AC004147.1-201ENST00000580658 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms