RNA–Protein interactions for RNA: ENST00000580499.1

RNF138-206, Transcript of ring finger protein 138, humanhuman

TSL 2

Gene RNF138, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-206ENST00000580499 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
RNF138-206ENST00000580499 ABCC9O60706 1549 aa33.1■■■□□ 2.89
RNF138-206ENST00000580499 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
RNF138-206ENST00000580499 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
RNF138-206ENST00000580499 NACADO15069 1562 aa31.22■■■□□ 2.59
RNF138-206ENST00000580499 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
RNF138-206ENST00000580499 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
RNF138-206ENST00000580499 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
RNF138-206ENST00000580499 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
RNF138-206ENST00000580499 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
RNF138-206ENST00000580499 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
RNF138-206ENST00000580499 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
RNF138-206ENST00000580499 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
RNF138-206ENST00000580499 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
RNF138-206ENST00000580499 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
RNF138-206ENST00000580499 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
RNF138-206ENST00000580499 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
RNF138-206ENST00000580499 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
RNF138-206ENST00000580499 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
RNF138-206ENST00000580499 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
RNF138-206ENST00000580499 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
RNF138-206ENST00000580499 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
RNF138-206ENST00000580499 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
RNF138-206ENST00000580499 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
RNF138-206ENST00000580499 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
RNF138-206ENST00000580499 CUX2O14529 1486 aa28.56■■■□□ 2.16
RNF138-206ENST00000580499 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
RNF138-206ENST00000580499 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
RNF138-206ENST00000580499 NESP48681 1621 aa28.4■■■□□ 2.14
RNF138-206ENST00000580499 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
RNF138-206ENST00000580499 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
RNF138-206ENST00000580499 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
RNF138-206ENST00000580499 THOC2Q8NI27 1593 aaKnown RBP28.08■■■□□ 2.09
RNF138-206ENST00000580499 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
RNF138-206ENST00000580499 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
RNF138-206ENST00000580499 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
RNF138-206ENST00000580499 WIZO95785 1651 aa27.95■■■□□ 2.07
RNF138-206ENST00000580499 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
RNF138-206ENST00000580499 WDR62O43379 1518 aa27.7■■■□□ 2.02
RNF138-206ENST00000580499 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
RNF138-206ENST00000580499 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
RNF138-206ENST00000580499 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
RNF138-206ENST00000580499 CFTRP13569 1480 aa27.6■■■□□ 2.01
RNF138-206ENST00000580499 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
RNF138-206ENST00000580499 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
RNF138-206ENST00000580499 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
RNF138-206ENST00000580499 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
RNF138-206ENST00000580499 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
RNF138-206ENST00000580499 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
RNF138-206ENST00000580499 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
RNF138-206ENST00000580499 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
RNF138-206ENST00000580499 ZNF608Q9ULD9 1512 aaPredicted RBP27.08■■□□□ 1.93
RNF138-206ENST00000580499 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
RNF138-206ENST00000580499 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
RNF138-206ENST00000580499 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
RNF138-206ENST00000580499 RIMBP3CA6NJZ7 1639 aa26.88■■□□□ 1.89
RNF138-206ENST00000580499 RIMBP3BA6NNM3 1639 aa26.88■■□□□ 1.89
RNF138-206ENST00000580499 RIMBP3Q9UFD9 1639 aa26.88■■□□□ 1.89
RNF138-206ENST00000580499 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.89
RNF138-206ENST00000580499 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
RNF138-206ENST00000580499 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
RNF138-206ENST00000580499 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
RNF138-206ENST00000580499 FBLN2P98095 1184 aa26.77■■□□□ 1.88
RNF138-206ENST00000580499 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
RNF138-206ENST00000580499 SOGA1O94964 1423 aa26.73■■□□□ 1.87
RNF138-206ENST00000580499 CHD1O14646 1710 aa26.72■■□□□ 1.87
RNF138-206ENST00000580499 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
RNF138-206ENST00000580499 CYB5RLQ6IPT4 315 aa26.68■■□□□ 1.86
RNF138-206ENST00000580499 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
RNF138-206ENST00000580499 CUX1P39880 1505 aa26.59■■□□□ 1.85
RNF138-206ENST00000580499 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
RNF138-206ENST00000580499 SNAPC4Q5SXM2 1469 aa26.56■■□□□ 1.84
RNF138-206ENST00000580499 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
RNF138-206ENST00000580499 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
RNF138-206ENST00000580499 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
RNF138-206ENST00000580499 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
RNF138-206ENST00000580499 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
RNF138-206ENST00000580499 TRHP20396 242 aaPredicted RBP26.44■■□□□ 1.82
RNF138-206ENST00000580499 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
RNF138-206ENST00000580499 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
RNF138-206ENST00000580499 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
RNF138-206ENST00000580499 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
RNF138-206ENST00000580499 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
RNF138-206ENST00000580499 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.81
RNF138-206ENST00000580499 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
RNF138-206ENST00000580499 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
RNF138-206ENST00000580499 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
RNF138-206ENST00000580499 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
RNF138-206ENST00000580499 BIVM-ERCC5R4GMW8 1640 aa26.13■■□□□ 1.77
RNF138-206ENST00000580499 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
RNF138-206ENST00000580499 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
RNF138-206ENST00000580499 NUP160Q12769 1436 aa26.04■■□□□ 1.76
RNF138-206ENST00000580499 CEP170Q5SW79 1584 aa26.02■■□□□ 1.76
RNF138-206ENST00000580499 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
RNF138-206ENST00000580499 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
RNF138-206ENST00000580499 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
RNF138-206ENST00000580499 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
RNF138-206ENST00000580499 PRG4Q92954 1404 aaPredicted RBP25.84■■□□□ 1.73
RNF138-206ENST00000580499 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
RNF138-206ENST00000580499 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms