RNA–Protein interactions for RNA: ENST00000580402.5

MBP-238, Transcript of myelin basic protein, humanhuman

TSL 5 BASIC

Gene MBP, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBP-238ENST00000580402 NISCHQ9Y2I1 1504 aa33.2■■■□□ 2.91
MBP-238ENST00000580402 ABCC9O60706 1549 aa29.95■■■□□ 2.38
MBP-238ENST00000580402 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
MBP-238ENST00000580402 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
MBP-238ENST00000580402 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
MBP-238ENST00000580402 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
MBP-238ENST00000580402 NACADO15069 1562 aa28.14■■■□□ 2.1
MBP-238ENST00000580402 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
MBP-238ENST00000580402 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
MBP-238ENST00000580402 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
MBP-238ENST00000580402 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
MBP-238ENST00000580402 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
MBP-238ENST00000580402 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
MBP-238ENST00000580402 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
MBP-238ENST00000580402 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
MBP-238ENST00000580402 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
MBP-238ENST00000580402 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
MBP-238ENST00000580402 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
MBP-238ENST00000580402 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
MBP-238ENST00000580402 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
MBP-238ENST00000580402 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
MBP-238ENST00000580402 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
MBP-238ENST00000580402 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
MBP-238ENST00000580402 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
MBP-238ENST00000580402 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
MBP-238ENST00000580402 CUX2O14529 1486 aa25.75■■□□□ 1.71
MBP-238ENST00000580402 NESP48681 1621 aa25.74■■□□□ 1.71
MBP-238ENST00000580402 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
MBP-238ENST00000580402 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
MBP-238ENST00000580402 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
MBP-238ENST00000580402 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
MBP-238ENST00000580402 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
MBP-238ENST00000580402 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
MBP-238ENST00000580402 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
MBP-238ENST00000580402 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
MBP-238ENST00000580402 WIZO95785 1651 aa25.28■■□□□ 1.64
MBP-238ENST00000580402 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
MBP-238ENST00000580402 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
MBP-238ENST00000580402 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
MBP-238ENST00000580402 WDR62O43379 1518 aa25.02■■□□□ 1.6
MBP-238ENST00000580402 CFTRP13569 1480 aa24.96■■□□□ 1.59
MBP-238ENST00000580402 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
MBP-238ENST00000580402 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
MBP-238ENST00000580402 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
MBP-238ENST00000580402 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
MBP-238ENST00000580402 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
MBP-238ENST00000580402 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
MBP-238ENST00000580402 OSCARQ8IYS5 282 aa24.66■■□□□ 1.54
MBP-238ENST00000580402 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
MBP-238ENST00000580402 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
MBP-238ENST00000580402 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
MBP-238ENST00000580402 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
MBP-238ENST00000580402 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
MBP-238ENST00000580402 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.49
MBP-238ENST00000580402 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.48
MBP-238ENST00000580402 RIMBP3CA6NJZ7 1639 aa24.29■■□□□ 1.48
MBP-238ENST00000580402 RIMBP3BA6NNM3 1639 aa24.29■■□□□ 1.48
MBP-238ENST00000580402 RIMBP3Q9UFD9 1639 aa24.29■■□□□ 1.48
MBP-238ENST00000580402 SUPT5HO00267 1087 aaKnown RBP24.29■■□□□ 1.48
MBP-238ENST00000580402 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
MBP-238ENST00000580402 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
MBP-238ENST00000580402 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
MBP-238ENST00000580402 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
MBP-238ENST00000580402 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
MBP-238ENST00000580402 FBLN2P98095 1184 aa24.16■■□□□ 1.46
MBP-238ENST00000580402 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
MBP-238ENST00000580402 SOGA1O94964 1423 aa24.15■■□□□ 1.46
MBP-238ENST00000580402 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
MBP-238ENST00000580402 CHD1O14646 1710 aa24.12■■□□□ 1.45
MBP-238ENST00000580402 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
MBP-238ENST00000580402 CUX1P39880 1505 aa24.05■■□□□ 1.44
MBP-238ENST00000580402 ARAP1Q96P48 1450 aa24■■□□□ 1.43
MBP-238ENST00000580402 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
MBP-238ENST00000580402 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
MBP-238ENST00000580402 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
MBP-238ENST00000580402 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
MBP-238ENST00000580402 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
MBP-238ENST00000580402 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
MBP-238ENST00000580402 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
MBP-238ENST00000580402 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
MBP-238ENST00000580402 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
MBP-238ENST00000580402 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
MBP-238ENST00000580402 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
MBP-238ENST00000580402 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
MBP-238ENST00000580402 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
MBP-238ENST00000580402 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
MBP-238ENST00000580402 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
MBP-238ENST00000580402 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
MBP-238ENST00000580402 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
MBP-238ENST00000580402 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
MBP-238ENST00000580402 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
MBP-238ENST00000580402 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
MBP-238ENST00000580402 NUP160Q12769 1436 aa23.53■■□□□ 1.36
MBP-238ENST00000580402 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
MBP-238ENST00000580402 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
MBP-238ENST00000580402 SHROOM2Q13796 1616 aa23.4■■□□□ 1.34
MBP-238ENST00000580402 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
MBP-238ENST00000580402 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
MBP-238ENST00000580402 IGF1RP08069 1367 aa23.25■■□□□ 1.31
MBP-238ENST00000580402 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms