RNA–Protein interactions for RNA: ENST00000580056.5

CCDC144NL-AS1-212, CCDC144NL antisense RNA 1, humanhuman

TSL 4

Gene CCDC144NL-AS1, Length 521 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-212ENST00000580056 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
CCDC144NL-AS1-212ENST00000580056 ABCC9O60706 1549 aa36.64■■■■□ 3.46
CCDC144NL-AS1-212ENST00000580056 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
CCDC144NL-AS1-212ENST00000580056 RB1CC1Q8TDY2 1594 aa34.84■■■■□ 3.17
CCDC144NL-AS1-212ENST00000580056 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
CCDC144NL-AS1-212ENST00000580056 NACADO15069 1562 aa34.5■■■■□ 3.11
CCDC144NL-AS1-212ENST00000580056 UNC13AQ9UPW8 1703 aa34.08■■■■□ 3.05
CCDC144NL-AS1-212ENST00000580056 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
CCDC144NL-AS1-212ENST00000580056 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
CCDC144NL-AS1-212ENST00000580056 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
CCDC144NL-AS1-212ENST00000580056 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
CCDC144NL-AS1-212ENST00000580056 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
CCDC144NL-AS1-212ENST00000580056 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
CCDC144NL-AS1-212ENST00000580056 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
CCDC144NL-AS1-212ENST00000580056 CC2D2AQ9P2K1 1620 aa33.17■■■□□ 2.9
CCDC144NL-AS1-212ENST00000580056 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
CCDC144NL-AS1-212ENST00000580056 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
CCDC144NL-AS1-212ENST00000580056 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
CCDC144NL-AS1-212ENST00000580056 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
CCDC144NL-AS1-212ENST00000580056 CUX2O14529 1486 aa31.91■■■□□ 2.7
CCDC144NL-AS1-212ENST00000580056 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
CCDC144NL-AS1-212ENST00000580056 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
CCDC144NL-AS1-212ENST00000580056 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
CCDC144NL-AS1-212ENST00000580056 SMARCA2P51531 1590 aa31.57■■■□□ 2.64
CCDC144NL-AS1-212ENST00000580056 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
CCDC144NL-AS1-212ENST00000580056 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
CCDC144NL-AS1-212ENST00000580056 NESP48681 1621 aa31.34■■■□□ 2.61
CCDC144NL-AS1-212ENST00000580056 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
CCDC144NL-AS1-212ENST00000580056 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
CCDC144NL-AS1-212ENST00000580056 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
CCDC144NL-AS1-212ENST00000580056 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
CCDC144NL-AS1-212ENST00000580056 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
CCDC144NL-AS1-212ENST00000580056 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
CCDC144NL-AS1-212ENST00000580056 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
CCDC144NL-AS1-212ENST00000580056 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
CCDC144NL-AS1-212ENST00000580056 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
CCDC144NL-AS1-212ENST00000580056 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
CCDC144NL-AS1-212ENST00000580056 WDR62O43379 1518 aa30.69■■■□□ 2.5
CCDC144NL-AS1-212ENST00000580056 TRIM41Q8WV44 630 aa30.61■■■□□ 2.49
CCDC144NL-AS1-212ENST00000580056 WIZO95785 1651 aa30.55■■■□□ 2.48
CCDC144NL-AS1-212ENST00000580056 CEP164Q9UPV0 1460 aa30.53■■■□□ 2.48
CCDC144NL-AS1-212ENST00000580056 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
CCDC144NL-AS1-212ENST00000580056 CFTRP13569 1480 aa30.35■■■□□ 2.45
CCDC144NL-AS1-212ENST00000580056 OSCARQ8IYS5 282 aa30.31■■■□□ 2.44
CCDC144NL-AS1-212ENST00000580056 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
CCDC144NL-AS1-212ENST00000580056 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
CCDC144NL-AS1-212ENST00000580056 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
CCDC144NL-AS1-212ENST00000580056 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
CCDC144NL-AS1-212ENST00000580056 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
CCDC144NL-AS1-212ENST00000580056 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
CCDC144NL-AS1-212ENST00000580056 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
CCDC144NL-AS1-212ENST00000580056 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
CCDC144NL-AS1-212ENST00000580056 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
CCDC144NL-AS1-212ENST00000580056 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
CCDC144NL-AS1-212ENST00000580056 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
CCDC144NL-AS1-212ENST00000580056 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
CCDC144NL-AS1-212ENST00000580056 CCDC88BA6NC98 1476 aa29.79■■■□□ 2.36
CCDC144NL-AS1-212ENST00000580056 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
CCDC144NL-AS1-212ENST00000580056 DNMBPQ6XZF7 1577 aa29.7■■■□□ 2.35
CCDC144NL-AS1-212ENST00000580056 CHD1O14646 1710 aa29.65■■■□□ 2.34
CCDC144NL-AS1-212ENST00000580056 TARBP1Q13395 1621 aaKnown RBP29.61■■■□□ 2.33
CCDC144NL-AS1-212ENST00000580056 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
CCDC144NL-AS1-212ENST00000580056 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.32
CCDC144NL-AS1-212ENST00000580056 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
CCDC144NL-AS1-212ENST00000580056 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
CCDC144NL-AS1-212ENST00000580056 WDR97A6NE52 1622 aa29.4■■■□□ 2.3
CCDC144NL-AS1-212ENST00000580056 FBLN2P98095 1184 aa29.38■■■□□ 2.29
CCDC144NL-AS1-212ENST00000580056 TRHP20396 242 aaPredicted RBP29.37■■■□□ 2.29
CCDC144NL-AS1-212ENST00000580056 SOGA1O94964 1423 aa29.3■■■□□ 2.28
CCDC144NL-AS1-212ENST00000580056 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
CCDC144NL-AS1-212ENST00000580056 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
CCDC144NL-AS1-212ENST00000580056 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
CCDC144NL-AS1-212ENST00000580056 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
CCDC144NL-AS1-212ENST00000580056 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
CCDC144NL-AS1-212ENST00000580056 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
CCDC144NL-AS1-212ENST00000580056 FGD5Q6ZNL6 1462 aa29.2■■■□□ 2.26
CCDC144NL-AS1-212ENST00000580056 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
CCDC144NL-AS1-212ENST00000580056 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
CCDC144NL-AS1-212ENST00000580056 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
CCDC144NL-AS1-212ENST00000580056 CUX1P39880 1505 aa29.1■■■□□ 2.25
CCDC144NL-AS1-212ENST00000580056 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
CCDC144NL-AS1-212ENST00000580056 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
CCDC144NL-AS1-212ENST00000580056 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
CCDC144NL-AS1-212ENST00000580056 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
CCDC144NL-AS1-212ENST00000580056 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
CCDC144NL-AS1-212ENST00000580056 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
CCDC144NL-AS1-212ENST00000580056 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
CCDC144NL-AS1-212ENST00000580056 NUP160Q12769 1436 aa28.69■■■□□ 2.18
CCDC144NL-AS1-212ENST00000580056 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
CCDC144NL-AS1-212ENST00000580056 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
CCDC144NL-AS1-212ENST00000580056 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
CCDC144NL-AS1-212ENST00000580056 SHROOM2Q13796 1616 aa28.67■■■□□ 2.18
CCDC144NL-AS1-212ENST00000580056 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
CCDC144NL-AS1-212ENST00000580056 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
CCDC144NL-AS1-212ENST00000580056 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
CCDC144NL-AS1-212ENST00000580056 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
CCDC144NL-AS1-212ENST00000580056 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
CCDC144NL-AS1-212ENST00000580056 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
CCDC144NL-AS1-212ENST00000580056 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
CCDC144NL-AS1-212ENST00000580056 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms