RNA–Protein interactions for RNA: ENST00000579630.1

TRIM16-217, Transcript of tripartite motif containing 16, humanhuman

TSL 4

Gene TRIM16, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-217ENST00000579630 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
TRIM16-217ENST00000579630 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
TRIM16-217ENST00000579630 ABCC9O60706 1549 aa21.57■■□□□ 1.04
TRIM16-217ENST00000579630 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
TRIM16-217ENST00000579630 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
TRIM16-217ENST00000579630 NACADO15069 1562 aa20.65■□□□□ 0.9
TRIM16-217ENST00000579630 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
TRIM16-217ENST00000579630 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
TRIM16-217ENST00000579630 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
TRIM16-217ENST00000579630 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRIM16-217ENST00000579630 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
TRIM16-217ENST00000579630 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
TRIM16-217ENST00000579630 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
TRIM16-217ENST00000579630 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
TRIM16-217ENST00000579630 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
TRIM16-217ENST00000579630 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
TRIM16-217ENST00000579630 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
TRIM16-217ENST00000579630 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
TRIM16-217ENST00000579630 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
TRIM16-217ENST00000579630 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
TRIM16-217ENST00000579630 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
TRIM16-217ENST00000579630 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
TRIM16-217ENST00000579630 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
TRIM16-217ENST00000579630 SMARCA2P51531 1590 aa19.01■□□□□ 0.63
TRIM16-217ENST00000579630 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
TRIM16-217ENST00000579630 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
TRIM16-217ENST00000579630 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
TRIM16-217ENST00000579630 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
TRIM16-217ENST00000579630 WIZO95785 1651 aa18.77■□□□□ 0.6
TRIM16-217ENST00000579630 NESP48681 1621 aa18.66■□□□□ 0.58
TRIM16-217ENST00000579630 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
TRIM16-217ENST00000579630 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
TRIM16-217ENST00000579630 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
TRIM16-217ENST00000579630 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
TRIM16-217ENST00000579630 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
TRIM16-217ENST00000579630 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
TRIM16-217ENST00000579630 CFTRP13569 1480 aa18.43■□□□□ 0.54
TRIM16-217ENST00000579630 CUX2O14529 1486 aa18.4■□□□□ 0.54
TRIM16-217ENST00000579630 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
TRIM16-217ENST00000579630 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
TRIM16-217ENST00000579630 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
TRIM16-217ENST00000579630 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
TRIM16-217ENST00000579630 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
TRIM16-217ENST00000579630 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
TRIM16-217ENST00000579630 WDR62O43379 1518 aa18.18■□□□□ 0.5
TRIM16-217ENST00000579630 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
TRIM16-217ENST00000579630 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
TRIM16-217ENST00000579630 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
TRIM16-217ENST00000579630 TOPBP1Q92547 1522 aa18■□□□□ 0.47
TRIM16-217ENST00000579630 ABCC8Q09428 1581 aa18■□□□□ 0.47
TRIM16-217ENST00000579630 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
TRIM16-217ENST00000579630 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
TRIM16-217ENST00000579630 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
TRIM16-217ENST00000579630 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
TRIM16-217ENST00000579630 CUX1P39880 1505 aa17.85■□□□□ 0.45
TRIM16-217ENST00000579630 SOGA1O94964 1423 aa17.82■□□□□ 0.44
TRIM16-217ENST00000579630 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
TRIM16-217ENST00000579630 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
TRIM16-217ENST00000579630 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
TRIM16-217ENST00000579630 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM16-217ENST00000579630 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
TRIM16-217ENST00000579630 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
TRIM16-217ENST00000579630 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
TRIM16-217ENST00000579630 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
TRIM16-217ENST00000579630 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
TRIM16-217ENST00000579630 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
TRIM16-217ENST00000579630 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
TRIM16-217ENST00000579630 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
TRIM16-217ENST00000579630 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
TRIM16-217ENST00000579630 GRIN2BQ13224 1484 aa17.58■□□□□ 0.41
TRIM16-217ENST00000579630 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
TRIM16-217ENST00000579630 FBLN2P98095 1184 aa17.57■□□□□ 0.4
TRIM16-217ENST00000579630 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
TRIM16-217ENST00000579630 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
TRIM16-217ENST00000579630 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
TRIM16-217ENST00000579630 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
TRIM16-217ENST00000579630 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
TRIM16-217ENST00000579630 CHD1O14646 1710 aa17.43■□□□□ 0.38
TRIM16-217ENST00000579630 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
TRIM16-217ENST00000579630 IGF1RP08069 1367 aa17.4■□□□□ 0.38
TRIM16-217ENST00000579630 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
TRIM16-217ENST00000579630 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
TRIM16-217ENST00000579630 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
TRIM16-217ENST00000579630 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
TRIM16-217ENST00000579630 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
TRIM16-217ENST00000579630 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
TRIM16-217ENST00000579630 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
TRIM16-217ENST00000579630 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
TRIM16-217ENST00000579630 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
TRIM16-217ENST00000579630 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
TRIM16-217ENST00000579630 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
TRIM16-217ENST00000579630 NUP160Q12769 1436 aa17.3■□□□□ 0.36
TRIM16-217ENST00000579630 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
TRIM16-217ENST00000579630 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
TRIM16-217ENST00000579630 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
TRIM16-217ENST00000579630 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
TRIM16-217ENST00000579630 ARAP1Q96P48 1450 aa17.22■□□□□ 0.35
TRIM16-217ENST00000579630 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
TRIM16-217ENST00000579630 CUL7Q14999 1698 aa17.14■□□□□ 0.33
TRIM16-217ENST00000579630 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 377.6 ms