RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 NISCHQ9Y2I1 1504 aa40.46■■■■■ 4.07
IFT20-209ENST00000579419 ABCC9O60706 1549 aa37.29■■■■□ 3.56
IFT20-209ENST00000579419 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
IFT20-209ENST00000579419 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
IFT20-209ENST00000579419 RB1CC1Q8TDY2 1594 aa35.07■■■■□ 3.2
IFT20-209ENST00000579419 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
IFT20-209ENST00000579419 NACADO15069 1562 aa34.66■■■■□ 3.14
IFT20-209ENST00000579419 DCAF8L2P0C7V8 631 aa34.51■■■■□ 3.12
IFT20-209ENST00000579419 UNC13AQ9UPW8 1703 aa34.25■■■■□ 3.07
IFT20-209ENST00000579419 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
IFT20-209ENST00000579419 MYO15BQ96JP2 1530 aa33.95■■■■□ 3.03
IFT20-209ENST00000579419 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
IFT20-209ENST00000579419 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.97
IFT20-209ENST00000579419 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
IFT20-209ENST00000579419 ZCCHC6Q5VYS8 1495 aaKnown RBP33.4■■■□□ 2.94
IFT20-209ENST00000579419 EIF4G1Q04637 1599 aaKnown RBP33.35■■■□□ 2.93
IFT20-209ENST00000579419 SCRIBQ14160 1630 aa33.32■■■□□ 2.92
IFT20-209ENST00000579419 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
IFT20-209ENST00000579419 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
IFT20-209ENST00000579419 CUX2O14529 1486 aa32.29■■■□□ 2.76
IFT20-209ENST00000579419 ERCC6Q03468 1493 aa32.17■■■□□ 2.74
IFT20-209ENST00000579419 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
IFT20-209ENST00000579419 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
IFT20-209ENST00000579419 NESP48681 1621 aa31.87■■■□□ 2.69
IFT20-209ENST00000579419 HMGXB3Q12766 1538 aa31.73■■■□□ 2.67
IFT20-209ENST00000579419 SMARCA2P51531 1590 aa31.7■■■□□ 2.67
IFT20-209ENST00000579419 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
IFT20-209ENST00000579419 THOC2Q8NI27 1593 aaKnown RBP31.59■■■□□ 2.65
IFT20-209ENST00000579419 BAZ1BQ9UIG0 1483 aaKnown RBP31.54■■■□□ 2.64
IFT20-209ENST00000579419 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
IFT20-209ENST00000579419 BAZ1AQ9NRL2 1556 aaPredicted RBP31.4■■■□□ 2.62
IFT20-209ENST00000579419 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
IFT20-209ENST00000579419 PEG3Q9GZU2 1588 aa31.34■■■□□ 2.61
IFT20-209ENST00000579419 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
IFT20-209ENST00000579419 PDS5BQ9NTI5 1447 aa31.26■■■□□ 2.6
IFT20-209ENST00000579419 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
IFT20-209ENST00000579419 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
IFT20-209ENST00000579419 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
IFT20-209ENST00000579419 WDR62O43379 1518 aa31■■■□□ 2.55
IFT20-209ENST00000579419 CEP164Q9UPV0 1460 aa30.8■■■□□ 2.52
IFT20-209ENST00000579419 WIZO95785 1651 aa30.78■■■□□ 2.52
IFT20-209ENST00000579419 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
IFT20-209ENST00000579419 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
IFT20-209ENST00000579419 CFTRP13569 1480 aa30.59■■■□□ 2.49
IFT20-209ENST00000579419 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
IFT20-209ENST00000579419 RIMBP3CA6NJZ7 1639 aa30.42■■■□□ 2.46
IFT20-209ENST00000579419 RIMBP3BA6NNM3 1639 aa30.42■■■□□ 2.46
IFT20-209ENST00000579419 RIMBP3Q9UFD9 1639 aa30.42■■■□□ 2.46
IFT20-209ENST00000579419 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
IFT20-209ENST00000579419 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
IFT20-209ENST00000579419 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
IFT20-209ENST00000579419 ARHGEF11O15085 1522 aa30.28■■■□□ 2.44
IFT20-209ENST00000579419 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
IFT20-209ENST00000579419 CYB5RLQ6IPT4 315 aa30.14■■■□□ 2.42
IFT20-209ENST00000579419 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
IFT20-209ENST00000579419 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
IFT20-209ENST00000579419 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
IFT20-209ENST00000579419 EIF4G3O43432 1585 aaKnown RBP30.03■■■□□ 2.4
IFT20-209ENST00000579419 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
IFT20-209ENST00000579419 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
IFT20-209ENST00000579419 AQRO60306 1485 aaKnown RBP eCLIP29.96■■■□□ 2.39
IFT20-209ENST00000579419 CHD1O14646 1710 aa29.89■■■□□ 2.38
IFT20-209ENST00000579419 FBLN2P98095 1184 aa29.88■■■□□ 2.37
IFT20-209ENST00000579419 DNMBPQ6XZF7 1577 aa29.87■■■□□ 2.37
IFT20-209ENST00000579419 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
IFT20-209ENST00000579419 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
IFT20-209ENST00000579419 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
IFT20-209ENST00000579419 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
IFT20-209ENST00000579419 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
IFT20-209ENST00000579419 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
IFT20-209ENST00000579419 SOGA1O94964 1423 aa29.6■■■□□ 2.33
IFT20-209ENST00000579419 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
IFT20-209ENST00000579419 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
IFT20-209ENST00000579419 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.31
IFT20-209ENST00000579419 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
IFT20-209ENST00000579419 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
IFT20-209ENST00000579419 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
IFT20-209ENST00000579419 WDR97A6NE52 1622 aa29.38■■■□□ 2.29
IFT20-209ENST00000579419 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
IFT20-209ENST00000579419 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
IFT20-209ENST00000579419 CUX1P39880 1505 aa29.35■■■□□ 2.29
IFT20-209ENST00000579419 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
IFT20-209ENST00000579419 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
IFT20-209ENST00000579419 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
IFT20-209ENST00000579419 ABCA5Q8WWZ7 1642 aa29.07■■■□□ 2.24
IFT20-209ENST00000579419 ABCA10Q8WWZ4 1543 aa29.06■■■□□ 2.24
IFT20-209ENST00000579419 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
IFT20-209ENST00000579419 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
IFT20-209ENST00000579419 NUP160Q12769 1436 aa28.95■■■□□ 2.23
IFT20-209ENST00000579419 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
IFT20-209ENST00000579419 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
IFT20-209ENST00000579419 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.2
IFT20-209ENST00000579419 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
IFT20-209ENST00000579419 KIF13AQ9H1H9 1805 aa28.8■■■□□ 2.2
IFT20-209ENST00000579419 PRG4Q92954 1404 aaPredicted RBP28.75■■■□□ 2.19
IFT20-209ENST00000579419 FAM69CQ0P6D2 419 aa28.68■■■□□ 2.18
IFT20-209ENST00000579419 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
IFT20-209ENST00000579419 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
IFT20-209ENST00000579419 TOP2BQ02880 1626 aa28.64■■■□□ 2.18
IFT20-209ENST00000579419 ABCC10Q5T3U5 1492 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms