RNA–Protein interactions for RNA: ENST00000579256.1

AC004408.1-201, humanhuman

TSL 4 BASIC

Gene AC004408.1, Length 573 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004408.1-201ENST00000579256 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
AC004408.1-201ENST00000579256 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
AC004408.1-201ENST00000579256 ABCC9O60706 1549 aa36.59■■■■□ 3.45
AC004408.1-201ENST00000579256 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
AC004408.1-201ENST00000579256 NACADO15069 1562 aa34.59■■■■□ 3.13
AC004408.1-201ENST00000579256 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
AC004408.1-201ENST00000579256 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
AC004408.1-201ENST00000579256 MYO15BQ96JP2 1530 aa34.17■■■■□ 3.06
AC004408.1-201ENST00000579256 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
AC004408.1-201ENST00000579256 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
AC004408.1-201ENST00000579256 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
AC004408.1-201ENST00000579256 BICRAQ9NZM4 1560 aa33.9■■■■□ 3.02
AC004408.1-201ENST00000579256 DCAF1Q9Y4B6 1507 aa33.79■■■■□ 3
AC004408.1-201ENST00000579256 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
AC004408.1-201ENST00000579256 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
AC004408.1-201ENST00000579256 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
AC004408.1-201ENST00000579256 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
AC004408.1-201ENST00000579256 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
AC004408.1-201ENST00000579256 NCAPD3P42695 1498 aa32■■■□□ 2.71
AC004408.1-201ENST00000579256 ATAD2BQ9ULI0 1458 aa31.93■■■□□ 2.7
AC004408.1-201ENST00000579256 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
AC004408.1-201ENST00000579256 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
AC004408.1-201ENST00000579256 HMGXB3Q12766 1538 aa31.73■■■□□ 2.67
AC004408.1-201ENST00000579256 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
AC004408.1-201ENST00000579256 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
AC004408.1-201ENST00000579256 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
AC004408.1-201ENST00000579256 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
AC004408.1-201ENST00000579256 NESP48681 1621 aa31.51■■■□□ 2.63
AC004408.1-201ENST00000579256 ERCC6Q03468 1493 aa31.49■■■□□ 2.63
AC004408.1-201ENST00000579256 CUX2O14529 1486 aa31.4■■■□□ 2.62
AC004408.1-201ENST00000579256 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
AC004408.1-201ENST00000579256 WIZO95785 1651 aa31.19■■■□□ 2.58
AC004408.1-201ENST00000579256 LAMC3Q9Y6N6 1575 aa31.18■■■□□ 2.58
AC004408.1-201ENST00000579256 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
AC004408.1-201ENST00000579256 CADPSQ9ULU8 1353 aa31.03■■■□□ 2.56
AC004408.1-201ENST00000579256 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
AC004408.1-201ENST00000579256 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
AC004408.1-201ENST00000579256 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
AC004408.1-201ENST00000579256 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
AC004408.1-201ENST00000579256 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
AC004408.1-201ENST00000579256 CFTRP13569 1480 aa30.71■■■□□ 2.51
AC004408.1-201ENST00000579256 WDR62O43379 1518 aa30.7■■■□□ 2.51
AC004408.1-201ENST00000579256 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
AC004408.1-201ENST00000579256 CEP164Q9UPV0 1460 aa30.64■■■□□ 2.5
AC004408.1-201ENST00000579256 CCDC88BA6NC98 1476 aa30.48■■■□□ 2.47
AC004408.1-201ENST00000579256 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
AC004408.1-201ENST00000579256 PRDM2Q13029 1718 aa30.29■■■□□ 2.44
AC004408.1-201ENST00000579256 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
AC004408.1-201ENST00000579256 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
AC004408.1-201ENST00000579256 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
AC004408.1-201ENST00000579256 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
AC004408.1-201ENST00000579256 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
AC004408.1-201ENST00000579256 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
AC004408.1-201ENST00000579256 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
AC004408.1-201ENST00000579256 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
AC004408.1-201ENST00000579256 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
AC004408.1-201ENST00000579256 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
AC004408.1-201ENST00000579256 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
AC004408.1-201ENST00000579256 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
AC004408.1-201ENST00000579256 CUX1P39880 1505 aa29.68■■■□□ 2.34
AC004408.1-201ENST00000579256 SUPT5HO00267 1087 aaKnown RBP29.68■■■□□ 2.34
AC004408.1-201ENST00000579256 SOGA1O94964 1423 aa29.66■■■□□ 2.34
AC004408.1-201ENST00000579256 FGD5Q6ZNL6 1462 aa29.64■■■□□ 2.34
AC004408.1-201ENST00000579256 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.33
AC004408.1-201ENST00000579256 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
AC004408.1-201ENST00000579256 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
AC004408.1-201ENST00000579256 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
AC004408.1-201ENST00000579256 CHD1O14646 1710 aa29.57■■■□□ 2.32
AC004408.1-201ENST00000579256 ARHGEF11O15085 1522 aa29.56■■■□□ 2.32
AC004408.1-201ENST00000579256 FBLN2P98095 1184 aa29.5■■■□□ 2.31
AC004408.1-201ENST00000579256 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
AC004408.1-201ENST00000579256 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
AC004408.1-201ENST00000579256 GRIN2BQ13224 1484 aa29.37■■■□□ 2.29
AC004408.1-201ENST00000579256 CYB5RLQ6IPT4 315 aa29.34■■■□□ 2.29
AC004408.1-201ENST00000579256 MAGI1Q96QZ7 1491 aaPredicted RBP29.34■■■□□ 2.29
AC004408.1-201ENST00000579256 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
AC004408.1-201ENST00000579256 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
AC004408.1-201ENST00000579256 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
AC004408.1-201ENST00000579256 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
AC004408.1-201ENST00000579256 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
AC004408.1-201ENST00000579256 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
AC004408.1-201ENST00000579256 ABCA5Q8WWZ7 1642 aa29.24■■■□□ 2.27
AC004408.1-201ENST00000579256 PBRM1Q86U86 1689 aa29.24■■■□□ 2.27
AC004408.1-201ENST00000579256 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
AC004408.1-201ENST00000579256 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
AC004408.1-201ENST00000579256 TOP2BQ02880 1626 aa29.17■■■□□ 2.26
AC004408.1-201ENST00000579256 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
AC004408.1-201ENST00000579256 ADAMTS12P58397 1594 aa29.01■■■□□ 2.24
AC004408.1-201ENST00000579256 GRIN2AQ12879 1464 aa29.01■■■□□ 2.23
AC004408.1-201ENST00000579256 NUP160Q12769 1436 aa28.94■■■□□ 2.22
AC004408.1-201ENST00000579256 CEP170Q5SW79 1584 aa28.93■■■□□ 2.22
AC004408.1-201ENST00000579256 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
AC004408.1-201ENST00000579256 TRHP20396 242 aaPredicted RBP28.91■■■□□ 2.22
AC004408.1-201ENST00000579256 ERCC6L2Q5T890 1561 aa28.91■■■□□ 2.22
AC004408.1-201ENST00000579256 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
AC004408.1-201ENST00000579256 SHROOM2Q13796 1616 aa28.77■■■□□ 2.2
AC004408.1-201ENST00000579256 IGF1RP08069 1367 aa28.65■■■□□ 2.18
AC004408.1-201ENST00000579256 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
AC004408.1-201ENST00000579256 JPH4Q96JJ6 628 aa28.63■■■□□ 2.17
AC004408.1-201ENST00000579256 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms