RNA–Protein interactions for RNA: ENST00000578642.1

GPS1-209, Transcript of G protein pathway suppressor 1, humanhuman

TSL 4

Gene GPS1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-209ENST00000578642 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
GPS1-209ENST00000578642 ABCC9O60706 1549 aa42.02■■■■■ 4.32
GPS1-209ENST00000578642 CCDC180Q9P1Z9 1646 aa41.71■■■■■ 4.27
GPS1-209ENST00000578642 RB1CC1Q8TDY2 1594 aa39.86■■■■□ 3.97
GPS1-209ENST00000578642 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
GPS1-209ENST00000578642 NACADO15069 1562 aa39.5■■■■□ 3.91
GPS1-209ENST00000578642 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
GPS1-209ENST00000578642 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.851e-7■□□□□ 9.2
GPS1-209ENST00000578642 UNC13AQ9UPW8 1703 aa38.93■■■■□ 3.82
GPS1-209ENST00000578642 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
GPS1-209ENST00000578642 BICRAQ9NZM4 1560 aa38.66■■■■□ 3.78
GPS1-209ENST00000578642 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
GPS1-209ENST00000578642 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
GPS1-209ENST00000578642 SHROOM4Q9ULL8 1493 aa38.11■■■■□ 3.69
GPS1-209ENST00000578642 SCRIBQ14160 1630 aa38.06■■■■□ 3.68
GPS1-209ENST00000578642 CC2D2AQ9P2K1 1620 aa37.91■■■■□ 3.66
GPS1-209ENST00000578642 CECR2Q9BXF3 1484 aa37.87■■■■□ 3.65
GPS1-209ENST00000578642 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.64
GPS1-209ENST00000578642 DNAJC5Q9H3Z4 198 aa36.54■■■■□ 3.44
GPS1-209ENST00000578642 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
GPS1-209ENST00000578642 ERCC6Q03468 1493 aa36.34■■■■□ 3.41
GPS1-209ENST00000578642 ATAD2BQ9ULI0 1458 aa36.33■■■■□ 3.41
GPS1-209ENST00000578642 CUX2O14529 1486 aa36.28■■■■□ 3.4
GPS1-209ENST00000578642 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
GPS1-209ENST00000578642 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
GPS1-209ENST00000578642 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
GPS1-209ENST00000578642 BAZ1AQ9NRL2 1556 aaPredicted RBP36.03■■■■□ 3.36
GPS1-209ENST00000578642 NESP48681 1621 aa36.01■■■■□ 3.36
GPS1-209ENST00000578642 BAZ1BQ9UIG0 1483 aaKnown RBP36.01■■■■□ 3.36
GPS1-209ENST00000578642 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
GPS1-209ENST00000578642 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
GPS1-209ENST00000578642 LAMC3Q9Y6N6 1575 aa35.7■■■■□ 3.31
GPS1-209ENST00000578642 THOC2Q8NI27 1593 aaKnown RBP35.66■■■■□ 3.3
GPS1-209ENST00000578642 KIF21AQ7Z4S6 1674 aa35.53■■■■□ 3.28
GPS1-209ENST00000578642 PDS5BQ9NTI5 1447 aa35.53■■■■□ 3.28
GPS1-209ENST00000578642 CADPSQ9ULU8 1353 aa35.37■■■■□ 3.25
GPS1-209ENST00000578642 WIZO95785 1651 aa35.32■■■■□ 3.24
GPS1-209ENST00000578642 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
GPS1-209ENST00000578642 WDR62O43379 1518 aa35.12■■■■□ 3.21
GPS1-209ENST00000578642 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
GPS1-209ENST00000578642 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
GPS1-209ENST00000578642 TRIM41Q8WV44 630 aa34.94■■■■□ 3.18
GPS1-209ENST00000578642 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
GPS1-209ENST00000578642 CFTRP13569 1480 aa34.9■■■■□ 3.18
GPS1-209ENST00000578642 TOP2AP11388 1531 aaKnown RBP34.85■■■■□ 3.17
GPS1-209ENST00000578642 URB2Q14146 1524 aaKnown RBP34.7■■■■□ 3.14
GPS1-209ENST00000578642 OSCARQ8IYS5 282 aa34.62■■■■□ 3.13
GPS1-209ENST00000578642 PRDM2Q13029 1718 aa34.54■■■■□ 3.12
GPS1-209ENST00000578642 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
GPS1-209ENST00000578642 IFT140Q96RY7 1462 aa34.35■■■■□ 3.09
GPS1-209ENST00000578642 ZNF608Q9ULD9 1512 aaPredicted RBP34.32■■■■□ 3.08
GPS1-209ENST00000578642 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
GPS1-209ENST00000578642 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
GPS1-209ENST00000578642 RIMBP3CA6NJZ7 1639 aa34.17■■■■□ 3.06
GPS1-209ENST00000578642 RIMBP3BA6NNM3 1639 aa34.17■■■■□ 3.06
GPS1-209ENST00000578642 RIMBP3Q9UFD9 1639 aa34.17■■■■□ 3.06
GPS1-209ENST00000578642 DNMBPQ6XZF7 1577 aa34.14■■■■□ 3.06
GPS1-209ENST00000578642 EIF4G3O43432 1585 aaKnown RBP34.12■■■■□ 3.05
GPS1-209ENST00000578642 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
GPS1-209ENST00000578642 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.03
GPS1-209ENST00000578642 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
GPS1-209ENST00000578642 POLA1P09884 1462 aaPredicted RBP33.92■■■■□ 3.02
GPS1-209ENST00000578642 CHD1O14646 1710 aa33.92■■■■□ 3.02
GPS1-209ENST00000578642 FBLN2P98095 1184 aa33.9■■■■□ 3.02
GPS1-209ENST00000578642 CYB5RLQ6IPT4 315 aa33.86■■■■□ 3.01
GPS1-209ENST00000578642 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3.01
GPS1-209ENST00000578642 SOGA1O94964 1423 aa33.79■■■■□ 3
GPS1-209ENST00000578642 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■■□ 3
GPS1-209ENST00000578642 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
GPS1-209ENST00000578642 ARAP1Q96P48 1450 aa33.69■■■□□ 2.98
GPS1-209ENST00000578642 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
GPS1-209ENST00000578642 TRHP20396 242 aaPredicted RBP33.61■■■□□ 2.97
GPS1-209ENST00000578642 CUX1P39880 1505 aa33.61■■■□□ 2.97
GPS1-209ENST00000578642 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
GPS1-209ENST00000578642 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
GPS1-209ENST00000578642 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
GPS1-209ENST00000578642 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
GPS1-209ENST00000578642 SYNJ1O43426 1573 aa33.49■■■□□ 2.95
GPS1-209ENST00000578642 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
GPS1-209ENST00000578642 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
GPS1-209ENST00000578642 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
GPS1-209ENST00000578642 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
GPS1-209ENST00000578642 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
GPS1-209ENST00000578642 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
GPS1-209ENST00000578642 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
GPS1-209ENST00000578642 WRNQ14191 1432 aaPredicted RBP eCLIP33.12■■■□□ 2.89
GPS1-209ENST00000578642 GRIN2AQ12879 1464 aa33.08■■■□□ 2.89
GPS1-209ENST00000578642 ADAMTS12P58397 1594 aa33.02■■■□□ 2.88
GPS1-209ENST00000578642 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
GPS1-209ENST00000578642 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
GPS1-209ENST00000578642 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
GPS1-209ENST00000578642 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
GPS1-209ENST00000578642 NUP160Q12769 1436 aa32.94■■■□□ 2.86
GPS1-209ENST00000578642 FHAD1B1AJZ9 1412 aa32.93■■■□□ 2.86
GPS1-209ENST00000578642 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
GPS1-209ENST00000578642 SHROOM2Q13796 1616 aa32.82■■■□□ 2.84
GPS1-209ENST00000578642 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
GPS1-209ENST00000578642 PRG4Q92954 1404 aaPredicted RBP32.7■■■□□ 2.83
GPS1-209ENST00000578642 JPH4Q96JJ6 628 aa32.65■■■□□ 2.82
GPS1-209ENST00000578642 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms