RNA–Protein interactions for RNA: ENST00000578542.5

PRR11-203, Transcript of proline rich 11, humanhuman

TSL 5

Gene PRR11, Length 2,334 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR11-203ENST00000578542 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
PRR11-203ENST00000578542 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
PRR11-203ENST00000578542 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
PRR11-203ENST00000578542 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
PRR11-203ENST00000578542 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
PRR11-203ENST00000578542 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
PRR11-203ENST00000578542 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
PRR11-203ENST00000578542 HRCP23327 699 aa20.24■□□□□ 0.83
PRR11-203ENST00000578542 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
PRR11-203ENST00000578542 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
PRR11-203ENST00000578542 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
PRR11-203ENST00000578542 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
PRR11-203ENST00000578542 ABCC9O60706 1549 aa19.64■□□□□ 0.73
PRR11-203ENST00000578542 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
PRR11-203ENST00000578542 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
PRR11-203ENST00000578542 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.71
PRR11-203ENST00000578542 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
PRR11-203ENST00000578542 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
PRR11-203ENST00000578542 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.68
PRR11-203ENST00000578542 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
PRR11-203ENST00000578542 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
PRR11-203ENST00000578542 NACADO15069 1562 aa19.08■□□□□ 0.64
PRR11-203ENST00000578542 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
PRR11-203ENST00000578542 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
PRR11-203ENST00000578542 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
PRR11-203ENST00000578542 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
PRR11-203ENST00000578542 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
PRR11-203ENST00000578542 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
PRR11-203ENST00000578542 WIZO95785 1651 aa18.82■□□□□ 0.6
PRR11-203ENST00000578542 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
PRR11-203ENST00000578542 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
PRR11-203ENST00000578542 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
PRR11-203ENST00000578542 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
PRR11-203ENST00000578542 CCER1Q8TC90 406 aaPredicted RBP18.6■□□□□ 0.57
PRR11-203ENST00000578542 EEA1Q15075 1411 aa18.59■□□□□ 0.57
PRR11-203ENST00000578542 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
PRR11-203ENST00000578542 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
PRR11-203ENST00000578542 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
PRR11-203ENST00000578542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
PRR11-203ENST00000578542 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
PRR11-203ENST00000578542 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
PRR11-203ENST00000578542 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
PRR11-203ENST00000578542 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
PRR11-203ENST00000578542 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
PRR11-203ENST00000578542 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
PRR11-203ENST00000578542 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
PRR11-203ENST00000578542 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
PRR11-203ENST00000578542 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
PRR11-203ENST00000578542 SOGA1O94964 1423 aa18.38■□□□□ 0.53
PRR11-203ENST00000578542 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
PRR11-203ENST00000578542 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
PRR11-203ENST00000578542 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
PRR11-203ENST00000578542 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
PRR11-203ENST00000578542 MYT1Q01538 1121 aa18.27■□□□□ 0.51
PRR11-203ENST00000578542 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
PRR11-203ENST00000578542 KIF21BO75037 1637 aa18.26■□□□□ 0.51
PRR11-203ENST00000578542 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
PRR11-203ENST00000578542 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
PRR11-203ENST00000578542 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
PRR11-203ENST00000578542 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
PRR11-203ENST00000578542 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
PRR11-203ENST00000578542 CLIP1P30622 1438 aa18.11■□□□□ 0.49
PRR11-203ENST00000578542 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
PRR11-203ENST00000578542 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
PRR11-203ENST00000578542 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
PRR11-203ENST00000578542 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
PRR11-203ENST00000578542 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
PRR11-203ENST00000578542 APLP2Q06481 763 aa17.97■□□□□ 0.47
PRR11-203ENST00000578542 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
PRR11-203ENST00000578542 MIER1Q8N108 512 aa17.97■□□□□ 0.47
PRR11-203ENST00000578542 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
PRR11-203ENST00000578542 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
PRR11-203ENST00000578542 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
PRR11-203ENST00000578542 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
PRR11-203ENST00000578542 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
PRR11-203ENST00000578542 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
PRR11-203ENST00000578542 PRXQ9BXM0 1461 aa17.85■□□□□ 0.45
PRR11-203ENST00000578542 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
PRR11-203ENST00000578542 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
PRR11-203ENST00000578542 CUX2O14529 1486 aa17.8■□□□□ 0.44
PRR11-203ENST00000578542 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
PRR11-203ENST00000578542 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
PRR11-203ENST00000578542 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
PRR11-203ENST00000578542 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
PRR11-203ENST00000578542 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
PRR11-203ENST00000578542 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
PRR11-203ENST00000578542 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
PRR11-203ENST00000578542 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
PRR11-203ENST00000578542 CUX1P39880 1505 aa17.62■□□□□ 0.41
PRR11-203ENST00000578542 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.41
PRR11-203ENST00000578542 SUPT16HQ9Y5B9 1047 aaKnown RBP17.58■□□□□ 0.4
PRR11-203ENST00000578542 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
PRR11-203ENST00000578542 CFTRP13569 1480 aa17.55■□□□□ 0.4
PRR11-203ENST00000578542 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
PRR11-203ENST00000578542 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
PRR11-203ENST00000578542 MAPKBP1O60336 1514 aa17.48■□□□□ 0.39
PRR11-203ENST00000578542 TIMELESSQ9UNS1 1208 aa17.47■□□□□ 0.39
PRR11-203ENST00000578542 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
PRR11-203ENST00000578542 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
PRR11-203ENST00000578542 IGF1RP08069 1367 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms