RNA–Protein interactions for RNA: ENST00000578476.5

EIF4A1-208, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-208ENST00000578476 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
EIF4A1-208ENST00000578476 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
EIF4A1-208ENST00000578476 ABCC9O60706 1549 aa34.01■■■■□ 3.04
EIF4A1-208ENST00000578476 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
EIF4A1-208ENST00000578476 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
EIF4A1-208ENST00000578476 NACADO15069 1562 aa32.88■■■□□ 2.85
EIF4A1-208ENST00000578476 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
EIF4A1-208ENST00000578476 MYO15BQ96JP2 1530 aa32.79■■■□□ 2.84
EIF4A1-208ENST00000578476 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
EIF4A1-208ENST00000578476 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
EIF4A1-208ENST00000578476 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.72
EIF4A1-208ENST00000578476 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
EIF4A1-208ENST00000578476 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
EIF4A1-208ENST00000578476 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
EIF4A1-208ENST00000578476 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
EIF4A1-208ENST00000578476 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
EIF4A1-208ENST00000578476 CECR2Q9BXF3 1484 aa30.86■■■□□ 2.53
EIF4A1-208ENST00000578476 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
EIF4A1-208ENST00000578476 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
EIF4A1-208ENST00000578476 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
EIF4A1-208ENST00000578476 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
EIF4A1-208ENST00000578476 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
EIF4A1-208ENST00000578476 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
EIF4A1-208ENST00000578476 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
EIF4A1-208ENST00000578476 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
EIF4A1-208ENST00000578476 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
EIF4A1-208ENST00000578476 WIZO95785 1651 aa30.23■■■□□ 2.43
EIF4A1-208ENST00000578476 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
EIF4A1-208ENST00000578476 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
EIF4A1-208ENST00000578476 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
EIF4A1-208ENST00000578476 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
EIF4A1-208ENST00000578476 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
EIF4A1-208ENST00000578476 NESP48681 1621 aa29.53■■■□□ 2.32
EIF4A1-208ENST00000578476 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
EIF4A1-208ENST00000578476 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
EIF4A1-208ENST00000578476 CFTRP13569 1480 aa29.4■■■□□ 2.3
EIF4A1-208ENST00000578476 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
EIF4A1-208ENST00000578476 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
EIF4A1-208ENST00000578476 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
EIF4A1-208ENST00000578476 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
EIF4A1-208ENST00000578476 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
EIF4A1-208ENST00000578476 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
EIF4A1-208ENST00000578476 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
EIF4A1-208ENST00000578476 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.22
EIF4A1-208ENST00000578476 WDR62O43379 1518 aa28.84■■■□□ 2.21
EIF4A1-208ENST00000578476 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
EIF4A1-208ENST00000578476 CUX2O14529 1486 aa28.82■■■□□ 2.2
EIF4A1-208ENST00000578476 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
EIF4A1-208ENST00000578476 TOPBP1Q92547 1522 aa28.73■■■□□ 2.19
EIF4A1-208ENST00000578476 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
EIF4A1-208ENST00000578476 CUX1P39880 1505 aa28.64■■■□□ 2.18
EIF4A1-208ENST00000578476 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.173e-6■■■■□ 21.9
EIF4A1-208ENST00000578476 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
EIF4A1-208ENST00000578476 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
EIF4A1-208ENST00000578476 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
EIF4A1-208ENST00000578476 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
EIF4A1-208ENST00000578476 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
EIF4A1-208ENST00000578476 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
EIF4A1-208ENST00000578476 SOGA1O94964 1423 aa28.43■■■□□ 2.14
EIF4A1-208ENST00000578476 RAD54L2Q9Y4B4 1467 aa28.4■■■□□ 2.14
EIF4A1-208ENST00000578476 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
EIF4A1-208ENST00000578476 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
EIF4A1-208ENST00000578476 TRIM41Q8WV44 630 aa28.25■■■□□ 2.11
EIF4A1-208ENST00000578476 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
EIF4A1-208ENST00000578476 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
EIF4A1-208ENST00000578476 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.113e-7■■■■□ 20
EIF4A1-208ENST00000578476 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
EIF4A1-208ENST00000578476 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
EIF4A1-208ENST00000578476 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
EIF4A1-208ENST00000578476 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
EIF4A1-208ENST00000578476 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
EIF4A1-208ENST00000578476 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
EIF4A1-208ENST00000578476 KIF27Q86VH2 1401 aa28■■■□□ 2.07
EIF4A1-208ENST00000578476 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
EIF4A1-208ENST00000578476 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
EIF4A1-208ENST00000578476 MAGI1Q96QZ7 1491 aaPredicted RBP27.91■■■□□ 2.06
EIF4A1-208ENST00000578476 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
EIF4A1-208ENST00000578476 FBLN2P98095 1184 aa27.86■■■□□ 2.05
EIF4A1-208ENST00000578476 RUSC2Q8N2Y8 1516 aa27.86■■■□□ 2.05
EIF4A1-208ENST00000578476 IGF1RP08069 1367 aa27.86■■■□□ 2.05
EIF4A1-208ENST00000578476 CHMP7Q8WUX9 453 aaPredicted RBP27.83■■■□□ 2.05
EIF4A1-208ENST00000578476 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
EIF4A1-208ENST00000578476 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
EIF4A1-208ENST00000578476 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
EIF4A1-208ENST00000578476 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
EIF4A1-208ENST00000578476 CHD1O14646 1710 aa27.72■■■□□ 2.03
EIF4A1-208ENST00000578476 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
EIF4A1-208ENST00000578476 EEA1Q15075 1411 aa27.69■■■□□ 2.02
EIF4A1-208ENST00000578476 CUL7Q14999 1698 aa27.68■■■□□ 2.02
EIF4A1-208ENST00000578476 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
EIF4A1-208ENST00000578476 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
EIF4A1-208ENST00000578476 CSRNP3Q8WYN3 585 aa27.66■■■□□ 2.02
EIF4A1-208ENST00000578476 DNAJC5Q9H3Z4 198 aa27.57■■■□□ 2
EIF4A1-208ENST00000578476 RAPGEF2Q9Y4G8 1499 aa27.56■■■□□ 2
EIF4A1-208ENST00000578476 PRXQ9BXM0 1461 aa27.54■■■□□ 2
EIF4A1-208ENST00000578476 NUP160Q12769 1436 aa27.53■■■□□ 2
EIF4A1-208ENST00000578476 CEP170Q5SW79 1584 aa27.49■■□□□ 1.99
EIF4A1-208ENST00000578476 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
EIF4A1-208ENST00000578476 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
EIF4A1-208ENST00000578476 KIF21BO75037 1637 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms