RNA–Protein interactions for RNA: ENST00000578471.2

AC011840.4-201, humanhuman

BASIC

Gene AC011840.4, Length 627 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.4-201ENST00000578471 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
AC011840.4-201ENST00000578471 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
AC011840.4-201ENST00000578471 ABCC9O60706 1549 aa37.56■■■■□ 3.6
AC011840.4-201ENST00000578471 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
AC011840.4-201ENST00000578471 RB1CC1Q8TDY2 1594 aa36.13■■■■□ 3.37
AC011840.4-201ENST00000578471 NACADO15069 1562 aa36.09■■■■□ 3.37
AC011840.4-201ENST00000578471 ZCCHC6Q5VYS8 1495 aaKnown RBP35.94■■■■□ 3.34
AC011840.4-201ENST00000578471 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
AC011840.4-201ENST00000578471 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
AC011840.4-201ENST00000578471 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
AC011840.4-201ENST00000578471 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
AC011840.4-201ENST00000578471 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
AC011840.4-201ENST00000578471 BICRAQ9NZM4 1560 aa34.92■■■■□ 3.18
AC011840.4-201ENST00000578471 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
AC011840.4-201ENST00000578471 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
AC011840.4-201ENST00000578471 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
AC011840.4-201ENST00000578471 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
AC011840.4-201ENST00000578471 CECR2Q9BXF3 1484 aa33.74■■■□□ 2.99
AC011840.4-201ENST00000578471 BAZ1AQ9NRL2 1556 aaPredicted RBP33.49■■■□□ 2.95
AC011840.4-201ENST00000578471 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
AC011840.4-201ENST00000578471 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
AC011840.4-201ENST00000578471 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
AC011840.4-201ENST00000578471 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
AC011840.4-201ENST00000578471 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
AC011840.4-201ENST00000578471 PEG3Q9GZU2 1588 aa33.12■■■□□ 2.89
AC011840.4-201ENST00000578471 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
AC011840.4-201ENST00000578471 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
AC011840.4-201ENST00000578471 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
AC011840.4-201ENST00000578471 WIZO95785 1651 aa32.92■■■□□ 2.86
AC011840.4-201ENST00000578471 TOP2AP11388 1531 aaKnown RBP32.57■■■□□ 2.8
AC011840.4-201ENST00000578471 NESP48681 1621 aa32.47■■■□□ 2.79
AC011840.4-201ENST00000578471 ERCC6Q03468 1493 aa32.43■■■□□ 2.78
AC011840.4-201ENST00000578471 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
AC011840.4-201ENST00000578471 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
AC011840.4-201ENST00000578471 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
AC011840.4-201ENST00000578471 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
AC011840.4-201ENST00000578471 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
AC011840.4-201ENST00000578471 CFTRP13569 1480 aa32.14■■■□□ 2.74
AC011840.4-201ENST00000578471 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
AC011840.4-201ENST00000578471 CUX2O14529 1486 aa31.98■■■□□ 2.71
AC011840.4-201ENST00000578471 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
AC011840.4-201ENST00000578471 CEP164Q9UPV0 1460 aa31.95■■■□□ 2.7
AC011840.4-201ENST00000578471 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
AC011840.4-201ENST00000578471 MRC2Q9UBG0 1479 aa31.87■■■□□ 2.69
AC011840.4-201ENST00000578471 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
AC011840.4-201ENST00000578471 WDR62O43379 1518 aa31.71■■■□□ 2.67
AC011840.4-201ENST00000578471 URB2Q14146 1524 aaKnown RBP31.61■■■□□ 2.65
AC011840.4-201ENST00000578471 ABCC8Q09428 1581 aa31.52■■■□□ 2.64
AC011840.4-201ENST00000578471 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
AC011840.4-201ENST00000578471 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
AC011840.4-201ENST00000578471 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
AC011840.4-201ENST00000578471 CUX1P39880 1505 aa31.2■■■□□ 2.59
AC011840.4-201ENST00000578471 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
AC011840.4-201ENST00000578471 SOGA1O94964 1423 aa31.15■■■□□ 2.58
AC011840.4-201ENST00000578471 FGD5Q6ZNL6 1462 aa31.13■■■□□ 2.57
AC011840.4-201ENST00000578471 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
AC011840.4-201ENST00000578471 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
AC011840.4-201ENST00000578471 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
AC011840.4-201ENST00000578471 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
AC011840.4-201ENST00000578471 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
AC011840.4-201ENST00000578471 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.55
AC011840.4-201ENST00000578471 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
AC011840.4-201ENST00000578471 TOP2BQ02880 1626 aa30.96■■■□□ 2.55
AC011840.4-201ENST00000578471 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
AC011840.4-201ENST00000578471 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
AC011840.4-201ENST00000578471 BIVM-ERCC5R4GMW8 1640 aa30.93■■■□□ 2.54
AC011840.4-201ENST00000578471 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
AC011840.4-201ENST00000578471 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
AC011840.4-201ENST00000578471 ABCA10Q8WWZ4 1543 aa30.82■■■□□ 2.52
AC011840.4-201ENST00000578471 FBLN2P98095 1184 aa30.75■■■□□ 2.51
AC011840.4-201ENST00000578471 GAPVD1Q14C86 1478 aa30.75■■■□□ 2.51
AC011840.4-201ENST00000578471 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
AC011840.4-201ENST00000578471 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
AC011840.4-201ENST00000578471 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
AC011840.4-201ENST00000578471 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
AC011840.4-201ENST00000578471 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
AC011840.4-201ENST00000578471 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
AC011840.4-201ENST00000578471 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
AC011840.4-201ENST00000578471 CHD1O14646 1710 aa30.55■■■□□ 2.48
AC011840.4-201ENST00000578471 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
AC011840.4-201ENST00000578471 KIF27Q86VH2 1401 aa30.48■■■□□ 2.47
AC011840.4-201ENST00000578471 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
AC011840.4-201ENST00000578471 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
AC011840.4-201ENST00000578471 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
AC011840.4-201ENST00000578471 IGF1RP08069 1367 aa30.33■■■□□ 2.45
AC011840.4-201ENST00000578471 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
AC011840.4-201ENST00000578471 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
AC011840.4-201ENST00000578471 CUL7Q14999 1698 aa30.19■■■□□ 2.42
AC011840.4-201ENST00000578471 CARMIL1Q5VZK9 1371 aa30.18■■■□□ 2.42
AC011840.4-201ENST00000578471 ARHGEF11O15085 1522 aa30.16■■■□□ 2.42
AC011840.4-201ENST00000578471 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.42
AC011840.4-201ENST00000578471 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.42
AC011840.4-201ENST00000578471 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.42
AC011840.4-201ENST00000578471 NUP160Q12769 1436 aa30.14■■■□□ 2.42
AC011840.4-201ENST00000578471 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
AC011840.4-201ENST00000578471 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
AC011840.4-201ENST00000578471 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
AC011840.4-201ENST00000578471 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
AC011840.4-201ENST00000578471 JPH4Q96JJ6 628 aa29.99■■■□□ 2.39
AC011840.4-201ENST00000578471 RAPGEF2Q9Y4G8 1499 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms