RNA–Protein interactions for RNA: ENST00000578444.1

MRPS23-202, Transcript of mitochondrial ribosomal protein S23, humanhuman

TSL 2 BASIC

Gene MRPS23, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS23-202ENST00000578444 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
MRPS23-202ENST00000578444 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.25
MRPS23-202ENST00000578444 ABCC9O60706 1549 aa35.23■■■■□ 3.23
MRPS23-202ENST00000578444 RB1CC1Q8TDY2 1594 aa33.54■■■□□ 2.96
MRPS23-202ENST00000578444 NACADO15069 1562 aa33.32■■■□□ 2.92
MRPS23-202ENST00000578444 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
MRPS23-202ENST00000578444 DNAJC5BQ9UF47 199 aa33.03■■■□□ 2.88
MRPS23-202ENST00000578444 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
MRPS23-202ENST00000578444 MYO15BQ96JP2 1530 aa32.85■■■□□ 2.85
MRPS23-202ENST00000578444 PABPN1Q86U42 306 aaKnown RBP eCLIP32.8■■■□□ 2.84
MRPS23-202ENST00000578444 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
MRPS23-202ENST00000578444 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
MRPS23-202ENST00000578444 DCAF1Q9Y4B6 1507 aa32.48■■■□□ 2.79
MRPS23-202ENST00000578444 SCRIBQ14160 1630 aa32.22■■■□□ 2.75
MRPS23-202ENST00000578444 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
MRPS23-202ENST00000578444 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
MRPS23-202ENST00000578444 EIF4G1Q04637 1599 aaKnown RBP31.79■■■□□ 2.68
MRPS23-202ENST00000578444 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
MRPS23-202ENST00000578444 NCAPD3P42695 1498 aa30.75■■■□□ 2.51
MRPS23-202ENST00000578444 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
MRPS23-202ENST00000578444 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.5
MRPS23-202ENST00000578444 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
MRPS23-202ENST00000578444 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
MRPS23-202ENST00000578444 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
MRPS23-202ENST00000578444 PEG3Q9GZU2 1588 aa30.4■■■□□ 2.46
MRPS23-202ENST00000578444 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
MRPS23-202ENST00000578444 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
MRPS23-202ENST00000578444 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
MRPS23-202ENST00000578444 NESP48681 1621 aa30.33■■■□□ 2.45
MRPS23-202ENST00000578444 CUX2O14529 1486 aa30.26■■■□□ 2.44
MRPS23-202ENST00000578444 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
MRPS23-202ENST00000578444 WIZO95785 1651 aa30.07■■■□□ 2.41
MRPS23-202ENST00000578444 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
MRPS23-202ENST00000578444 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
MRPS23-202ENST00000578444 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.4
MRPS23-202ENST00000578444 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
MRPS23-202ENST00000578444 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
MRPS23-202ENST00000578444 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
MRPS23-202ENST00000578444 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
MRPS23-202ENST00000578444 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
MRPS23-202ENST00000578444 WDR62O43379 1518 aa29.56■■■□□ 2.32
MRPS23-202ENST00000578444 CFTRP13569 1480 aa29.5■■■□□ 2.31
MRPS23-202ENST00000578444 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
MRPS23-202ENST00000578444 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
MRPS23-202ENST00000578444 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
MRPS23-202ENST00000578444 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
MRPS23-202ENST00000578444 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
MRPS23-202ENST00000578444 TOPBP1Q92547 1522 aa28.97■■■□□ 2.23
MRPS23-202ENST00000578444 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
MRPS23-202ENST00000578444 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
MRPS23-202ENST00000578444 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
MRPS23-202ENST00000578444 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
MRPS23-202ENST00000578444 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
MRPS23-202ENST00000578444 ABCC8Q09428 1581 aa28.83■■■□□ 2.21
MRPS23-202ENST00000578444 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
MRPS23-202ENST00000578444 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
MRPS23-202ENST00000578444 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
MRPS23-202ENST00000578444 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.181e-7■□□□□ 10.1
MRPS23-202ENST00000578444 CHD1O14646 1710 aa28.63■■■□□ 2.17
MRPS23-202ENST00000578444 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
MRPS23-202ENST00000578444 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
MRPS23-202ENST00000578444 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
MRPS23-202ENST00000578444 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
MRPS23-202ENST00000578444 CUX1P39880 1505 aa28.53■■■□□ 2.16
MRPS23-202ENST00000578444 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
MRPS23-202ENST00000578444 SOGA1O94964 1423 aa28.51■■■□□ 2.15
MRPS23-202ENST00000578444 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
MRPS23-202ENST00000578444 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
MRPS23-202ENST00000578444 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
MRPS23-202ENST00000578444 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
MRPS23-202ENST00000578444 FBLN2P98095 1184 aa28.38■■■□□ 2.13
MRPS23-202ENST00000578444 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
MRPS23-202ENST00000578444 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
MRPS23-202ENST00000578444 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
MRPS23-202ENST00000578444 MAGI1Q96QZ7 1491 aaPredicted RBP28.23■■■□□ 2.11
MRPS23-202ENST00000578444 CYB5RLQ6IPT4 315 aa28.23■■■□□ 2.11
MRPS23-202ENST00000578444 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
MRPS23-202ENST00000578444 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
MRPS23-202ENST00000578444 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
MRPS23-202ENST00000578444 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
MRPS23-202ENST00000578444 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
MRPS23-202ENST00000578444 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
MRPS23-202ENST00000578444 CHMP7Q8WUX9 453 aaPredicted RBP28.15■■■□□ 2.1
MRPS23-202ENST00000578444 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
MRPS23-202ENST00000578444 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
MRPS23-202ENST00000578444 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
MRPS23-202ENST00000578444 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.08
MRPS23-202ENST00000578444 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
MRPS23-202ENST00000578444 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
MRPS23-202ENST00000578444 CEP170Q5SW79 1584 aa27.87■■■□□ 2.05
MRPS23-202ENST00000578444 TRHP20396 242 aaPredicted RBP27.85■■■□□ 2.05
MRPS23-202ENST00000578444 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
MRPS23-202ENST00000578444 NUP160Q12769 1436 aa27.81■■■□□ 2.04
MRPS23-202ENST00000578444 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
MRPS23-202ENST00000578444 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
MRPS23-202ENST00000578444 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
MRPS23-202ENST00000578444 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
MRPS23-202ENST00000578444 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
MRPS23-202ENST00000578444 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
MRPS23-202ENST00000578444 IGF1RP08069 1367 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms