RNA–Protein interactions for RNA: ENST00000578321.1

SPECC1-212, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-212ENST00000578321 NISCHQ9Y2I1 1504 aa48.47■■■■■ 5.35
SPECC1-212ENST00000578321 ABCC9O60706 1549 aa43.38■■■■■ 4.53
SPECC1-212ENST00000578321 CCDC180Q9P1Z9 1646 aa43.36■■■■■ 4.53
SPECC1-212ENST00000578321 RB1CC1Q8TDY2 1594 aa41.29■■■■■ 4.2
SPECC1-212ENST00000578321 DCAF8L2P0C7V8 631 aa41.04■■■■■ 4.16
SPECC1-212ENST00000578321 NACADO15069 1562 aa41.03■■■■■ 4.16
SPECC1-212ENST00000578321 DNAJC5BQ9UF47 199 aa40.62■■■■■ 4.09
SPECC1-212ENST00000578321 MYO15BQ96JP2 1530 aa40.49■■■■■ 4.07
SPECC1-212ENST00000578321 PABPN1Q86U42 306 aaKnown RBP eCLIP40.47■■■■■ 4.07
SPECC1-212ENST00000578321 UNC13AQ9UPW8 1703 aa40.27■■■■■ 4.04
SPECC1-212ENST00000578321 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
SPECC1-212ENST00000578321 BICRAQ9NZM4 1560 aa40.05■■■■■ 4
SPECC1-212ENST00000578321 DCAF1Q9Y4B6 1507 aa40.01■■■■□ 3.99
SPECC1-212ENST00000578321 SCRIBQ14160 1630 aa39.59■■■■□ 3.93
SPECC1-212ENST00000578321 SHROOM4Q9ULL8 1493 aa39.52■■■■□ 3.92
SPECC1-212ENST00000578321 CC2D2AQ9P2K1 1620 aa39.14■■■■□ 3.86
SPECC1-212ENST00000578321 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
SPECC1-212ENST00000578321 CECR2Q9BXF3 1484 aa39.05■■■■□ 3.84
SPECC1-212ENST00000578321 NCAPD3P42695 1498 aa37.9■■■■□ 3.66
SPECC1-212ENST00000578321 ATAD2BQ9ULI0 1458 aa37.81■■■■□ 3.64
SPECC1-212ENST00000578321 SMARCA4P51532 1647 aa37.76■■■■□ 3.63
SPECC1-212ENST00000578321 SMARCA2P51531 1590 aa37.69■■■■□ 3.62
SPECC1-212ENST00000578321 BAZ1AQ9NRL2 1556 aaPredicted RBP37.61■■■■□ 3.61
SPECC1-212ENST00000578321 HMGXB3Q12766 1538 aa37.59■■■■□ 3.61
SPECC1-212ENST00000578321 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
SPECC1-212ENST00000578321 BAZ1BQ9UIG0 1483 aaKnown RBP37.45■■■■□ 3.59
SPECC1-212ENST00000578321 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
SPECC1-212ENST00000578321 MROH2BQ7Z745 1585 aa37.35■■■■□ 3.57
SPECC1-212ENST00000578321 CUX2O14529 1486 aa37.3■■■■□ 3.56
SPECC1-212ENST00000578321 NESP48681 1621 aa37.28■■■■□ 3.56
SPECC1-212ENST00000578321 DNAJC5Q9H3Z4 198 aa37.22■■■■□ 3.55
SPECC1-212ENST00000578321 LAMC3Q9Y6N6 1575 aa37■■■■□ 3.51
SPECC1-212ENST00000578321 WIZO95785 1651 aa36.89■■■■□ 3.5
SPECC1-212ENST00000578321 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
SPECC1-212ENST00000578321 THOC2Q8NI27 1593 aaKnown RBP36.8■■■■□ 3.48
SPECC1-212ENST00000578321 CADPSQ9ULU8 1353 aa36.79■■■■□ 3.48
SPECC1-212ENST00000578321 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
SPECC1-212ENST00000578321 RSF1Q96T23 1441 aaPredicted RBP36.65■■■■□ 3.46
SPECC1-212ENST00000578321 MRC2Q9UBG0 1479 aa36.49■■■■□ 3.43
SPECC1-212ENST00000578321 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
SPECC1-212ENST00000578321 CFTRP13569 1480 aa36.37■■■■□ 3.41
SPECC1-212ENST00000578321 CEP164Q9UPV0 1460 aa36.37■■■■□ 3.41
SPECC1-212ENST00000578321 WDR62O43379 1518 aa36.36■■■■□ 3.41
SPECC1-212ENST00000578321 FANCD2Q9BXW9 1451 aa36.36■■■■□ 3.41
SPECC1-212ENST00000578321 CCDC88BA6NC98 1476 aa36.07■■■■□ 3.37
SPECC1-212ENST00000578321 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
SPECC1-212ENST00000578321 PRDM2Q13029 1718 aa35.89■■■■□ 3.34
SPECC1-212ENST00000578321 OSCARQ8IYS5 282 aa35.73■■■■□ 3.31
SPECC1-212ENST00000578321 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
SPECC1-212ENST00000578321 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
SPECC1-212ENST00000578321 IFT140Q96RY7 1462 aa35.65■■■■□ 3.3
SPECC1-212ENST00000578321 ABCC8Q09428 1581 aa35.61■■■■□ 3.29
SPECC1-212ENST00000578321 ZNF608Q9ULD9 1512 aaPredicted RBP35.58■■■■□ 3.29
SPECC1-212ENST00000578321 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
SPECC1-212ENST00000578321 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
SPECC1-212ENST00000578321 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
SPECC1-212ENST00000578321 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
SPECC1-212ENST00000578321 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
SPECC1-212ENST00000578321 SUPT5HO00267 1087 aaKnown RBP35.23■■■■□ 3.23
SPECC1-212ENST00000578321 RAD54L2Q9Y4B4 1467 aa35.21■■■■□ 3.23
SPECC1-212ENST00000578321 SOGA1O94964 1423 aa35.2■■■■□ 3.23
SPECC1-212ENST00000578321 TDRD9Q8NDG6 1382 aaKnown RBP35.13■■■■□ 3.21
SPECC1-212ENST00000578321 FBLN2P98095 1184 aa35.13■■■■□ 3.21
SPECC1-212ENST00000578321 RIMBP3CA6NJZ7 1639 aa35.12■■■■□ 3.21
SPECC1-212ENST00000578321 RIMBP3BA6NNM3 1639 aa35.12■■■■□ 3.21
SPECC1-212ENST00000578321 RIMBP3Q9UFD9 1639 aa35.12■■■■□ 3.21
SPECC1-212ENST00000578321 FGD5Q6ZNL6 1462 aa35.11■■■■□ 3.21
SPECC1-212ENST00000578321 CUX1P39880 1505 aa35.08■■■■□ 3.21
SPECC1-212ENST00000578321 ARHGEF11O15085 1522 aa35.05■■■■□ 3.2
SPECC1-212ENST00000578321 CHD1O14646 1710 aa35.03■■■■□ 3.2
SPECC1-212ENST00000578321 WDR97A6NE52 1622 aa34.93■■■■□ 3.18
SPECC1-212ENST00000578321 SNAPC4Q5SXM2 1469 aa34.92■■■■□ 3.18
SPECC1-212ENST00000578321 CYB5RLQ6IPT4 315 aa34.89■■■■□ 3.18
SPECC1-212ENST00000578321 CHMP7Q8WUX9 453 aaPredicted RBP34.88■■■■□ 3.17
SPECC1-212ENST00000578321 GRIN2BQ13224 1484 aa34.85■■■■□ 3.17
SPECC1-212ENST00000578321 MAGI1Q96QZ7 1491 aaPredicted RBP34.82■■■■□ 3.16
SPECC1-212ENST00000578321 GAPVD1Q14C86 1478 aa34.76■■■■□ 3.15
SPECC1-212ENST00000578321 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
SPECC1-212ENST00000578321 ARAP1Q96P48 1450 aa34.71■■■■□ 3.15
SPECC1-212ENST00000578321 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
SPECC1-212ENST00000578321 SYNJ1O43426 1573 aa34.68■■■■□ 3.14
SPECC1-212ENST00000578321 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
SPECC1-212ENST00000578321 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
SPECC1-212ENST00000578321 PBRM1Q86U86 1689 aa34.63■■■■□ 3.13
SPECC1-212ENST00000578321 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
SPECC1-212ENST00000578321 TOP2BQ02880 1626 aa34.53■■■■□ 3.12
SPECC1-212ENST00000578321 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
SPECC1-212ENST00000578321 TRHP20396 242 aaPredicted RBP34.49■■■■□ 3.11
SPECC1-212ENST00000578321 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
SPECC1-212ENST00000578321 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
SPECC1-212ENST00000578321 FHAD1B1AJZ9 1412 aa34.32■■■■□ 3.08
SPECC1-212ENST00000578321 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
SPECC1-212ENST00000578321 NUP160Q12769 1436 aa34.26■■■■□ 3.07
SPECC1-212ENST00000578321 CEP170Q5SW79 1584 aa34.23■■■■□ 3.07
SPECC1-212ENST00000578321 ERCC6L2Q5T890 1561 aa34.15■■■■□ 3.06
SPECC1-212ENST00000578321 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
SPECC1-212ENST00000578321 JPH4Q96JJ6 628 aa34.01■■■■□ 3.03
SPECC1-212ENST00000578321 PRG4Q92954 1404 aaPredicted RBP33.97■■■■□ 3.03
SPECC1-212ENST00000578321 KIF27Q86VH2 1401 aa33.94■■■■□ 3.02
SPECC1-212ENST00000578321 IGF1RP08069 1367 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 273.6 ms