RNA–Protein interactions for RNA: ENST00000578267.5

MPDU1-217, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-217ENST00000578267 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
MPDU1-217ENST00000578267 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
MPDU1-217ENST00000578267 ABCC9O60706 1549 aa25.45■■□□□ 1.66
MPDU1-217ENST00000578267 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
MPDU1-217ENST00000578267 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.52
MPDU1-217ENST00000578267 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
MPDU1-217ENST00000578267 NACADO15069 1562 aa24.52■■□□□ 1.52
MPDU1-217ENST00000578267 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
MPDU1-217ENST00000578267 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
MPDU1-217ENST00000578267 SCRIBQ14160 1630 aa23.95■■□□□ 1.43
MPDU1-217ENST00000578267 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
MPDU1-217ENST00000578267 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
MPDU1-217ENST00000578267 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
MPDU1-217ENST00000578267 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
MPDU1-217ENST00000578267 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
MPDU1-217ENST00000578267 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
MPDU1-217ENST00000578267 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
MPDU1-217ENST00000578267 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
MPDU1-217ENST00000578267 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
MPDU1-217ENST00000578267 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
MPDU1-217ENST00000578267 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
MPDU1-217ENST00000578267 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
MPDU1-217ENST00000578267 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
MPDU1-217ENST00000578267 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
MPDU1-217ENST00000578267 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
MPDU1-217ENST00000578267 WIZO95785 1651 aa22.54■■□□□ 1.2
MPDU1-217ENST00000578267 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
MPDU1-217ENST00000578267 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
MPDU1-217ENST00000578267 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
MPDU1-217ENST00000578267 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
MPDU1-217ENST00000578267 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
MPDU1-217ENST00000578267 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
MPDU1-217ENST00000578267 NESP48681 1621 aa22.03■■□□□ 1.12
MPDU1-217ENST00000578267 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
MPDU1-217ENST00000578267 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
MPDU1-217ENST00000578267 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
MPDU1-217ENST00000578267 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
MPDU1-217ENST00000578267 CFTRP13569 1480 aa21.86■■□□□ 1.09
MPDU1-217ENST00000578267 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
MPDU1-217ENST00000578267 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
MPDU1-217ENST00000578267 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
MPDU1-217ENST00000578267 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
MPDU1-217ENST00000578267 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
MPDU1-217ENST00000578267 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
MPDU1-217ENST00000578267 CUX2O14529 1486 aa21.56■■□□□ 1.04
MPDU1-217ENST00000578267 WDR62O43379 1518 aa21.5■■□□□ 1.03
MPDU1-217ENST00000578267 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
MPDU1-217ENST00000578267 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
MPDU1-217ENST00000578267 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
MPDU1-217ENST00000578267 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
MPDU1-217ENST00000578267 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
MPDU1-217ENST00000578267 CUX1P39880 1505 aa21.31■■□□□ 1
MPDU1-217ENST00000578267 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
MPDU1-217ENST00000578267 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
MPDU1-217ENST00000578267 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
MPDU1-217ENST00000578267 SOGA1O94964 1423 aa21.22■□□□□ 0.99
MPDU1-217ENST00000578267 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
MPDU1-217ENST00000578267 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
MPDU1-217ENST00000578267 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
MPDU1-217ENST00000578267 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
MPDU1-217ENST00000578267 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
MPDU1-217ENST00000578267 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
MPDU1-217ENST00000578267 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
MPDU1-217ENST00000578267 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
MPDU1-217ENST00000578267 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.962e-6■■■■■ 43
MPDU1-217ENST00000578267 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
MPDU1-217ENST00000578267 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
MPDU1-217ENST00000578267 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
MPDU1-217ENST00000578267 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
MPDU1-217ENST00000578267 FBLN2P98095 1184 aa20.95■□□□□ 0.94
MPDU1-217ENST00000578267 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
MPDU1-217ENST00000578267 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
MPDU1-217ENST00000578267 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
MPDU1-217ENST00000578267 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
MPDU1-217ENST00000578267 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
MPDU1-217ENST00000578267 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
MPDU1-217ENST00000578267 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
MPDU1-217ENST00000578267 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
MPDU1-217ENST00000578267 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
MPDU1-217ENST00000578267 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
MPDU1-217ENST00000578267 CHD1O14646 1710 aa20.78■□□□□ 0.92
MPDU1-217ENST00000578267 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
MPDU1-217ENST00000578267 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
MPDU1-217ENST00000578267 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
MPDU1-217ENST00000578267 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
MPDU1-217ENST00000578267 IGF1RP08069 1367 aa20.7■□□□□ 0.9
MPDU1-217ENST00000578267 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
MPDU1-217ENST00000578267 CUL7Q14999 1698 aa20.69■□□□□ 0.9
MPDU1-217ENST00000578267 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
MPDU1-217ENST00000578267 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
MPDU1-217ENST00000578267 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
MPDU1-217ENST00000578267 EEA1Q15075 1411 aa20.62■□□□□ 0.89
MPDU1-217ENST00000578267 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
MPDU1-217ENST00000578267 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
MPDU1-217ENST00000578267 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
MPDU1-217ENST00000578267 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
MPDU1-217ENST00000578267 NUP160Q12769 1436 aa20.48■□□□□ 0.87
MPDU1-217ENST00000578267 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
MPDU1-217ENST00000578267 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
MPDU1-217ENST00000578267 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms