RNA–Protein interactions for RNA: ENST00000578033.1

ACADVL-209, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-209ENST00000578033 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
ACADVL-209ENST00000578033 CCDC180Q9P1Z9 1646 aa37.55■■■■□ 3.6
ACADVL-209ENST00000578033 ABCC9O60706 1549 aa36.55■■■■□ 3.44
ACADVL-209ENST00000578033 DCAF8L2P0C7V8 631 aa35.61■■■■□ 3.29
ACADVL-209ENST00000578033 ZCCHC6Q5VYS8 1495 aaKnown RBP35.57■■■■□ 3.28
ACADVL-209ENST00000578033 NACADO15069 1562 aa35.22■■■■□ 3.23
ACADVL-209ENST00000578033 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
ACADVL-209ENST00000578033 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
ACADVL-209ENST00000578033 MYO15BQ96JP2 1530 aa35.07■■■■□ 3.21
ACADVL-209ENST00000578033 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
ACADVL-209ENST00000578033 SCRIBQ14160 1630 aa34.51■■■■□ 3.11
ACADVL-209ENST00000578033 PABPN1Q86U42 306 aaKnown RBP eCLIP34.33■■■■□ 3.094e-18■■■■■ 35.5
ACADVL-209ENST00000578033 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
ACADVL-209ENST00000578033 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
ACADVL-209ENST00000578033 CECR2Q9BXF3 1484 aa33.29■■■□□ 2.92
ACADVL-209ENST00000578033 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
ACADVL-209ENST00000578033 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
ACADVL-209ENST00000578033 CC2D2AQ9P2K1 1620 aa33.01■■■□□ 2.87
ACADVL-209ENST00000578033 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
ACADVL-209ENST00000578033 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
ACADVL-209ENST00000578033 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
ACADVL-209ENST00000578033 RSF1Q96T23 1441 aaPredicted RBP32.7■■■□□ 2.83
ACADVL-209ENST00000578033 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
ACADVL-209ENST00000578033 WIZO95785 1651 aa32.62■■■□□ 2.81
ACADVL-209ENST00000578033 SMARCA2P51531 1590 aa32.56■■■□□ 2.8
ACADVL-209ENST00000578033 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
ACADVL-209ENST00000578033 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
ACADVL-209ENST00000578033 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
ACADVL-209ENST00000578033 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
ACADVL-209ENST00000578033 SUPT5HO00267 1087 aaKnown RBP32.35■■■□□ 2.77
ACADVL-209ENST00000578033 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
ACADVL-209ENST00000578033 CCDC88BA6NC98 1476 aa31.89■■■□□ 2.7
ACADVL-209ENST00000578033 NESP48681 1621 aa31.81■■■□□ 2.68
ACADVL-209ENST00000578033 CADPSQ9ULU8 1353 aa31.66■■■□□ 2.66
ACADVL-209ENST00000578033 LAMC3Q9Y6N6 1575 aa31.57■■■□□ 2.64
ACADVL-209ENST00000578033 CFTRP13569 1480 aa31.55■■■□□ 2.64
ACADVL-209ENST00000578033 KIF21AQ7Z4S6 1674 aa31.36■■■□□ 2.61
ACADVL-209ENST00000578033 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
ACADVL-209ENST00000578033 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
ACADVL-209ENST00000578033 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
ACADVL-209ENST00000578033 PRDM2Q13029 1718 aa31.28■■■□□ 2.6
ACADVL-209ENST00000578033 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
ACADVL-209ENST00000578033 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
ACADVL-209ENST00000578033 MRC2Q9UBG0 1479 aa31.05■■■□□ 2.56
ACADVL-209ENST00000578033 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
ACADVL-209ENST00000578033 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
ACADVL-209ENST00000578033 WDR62O43379 1518 aa30.92■■■□□ 2.54
ACADVL-209ENST00000578033 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
ACADVL-209ENST00000578033 CUX1P39880 1505 aa30.86■■■□□ 2.53
ACADVL-209ENST00000578033 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
ACADVL-209ENST00000578033 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.52
ACADVL-209ENST00000578033 CUX2O14529 1486 aa30.76■■■□□ 2.52
ACADVL-209ENST00000578033 SYNJ1O43426 1573 aa30.74■■■□□ 2.51
ACADVL-209ENST00000578033 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
ACADVL-209ENST00000578033 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
ACADVL-209ENST00000578033 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
ACADVL-209ENST00000578033 RAD54L2Q9Y4B4 1467 aa30.61■■■□□ 2.49
ACADVL-209ENST00000578033 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
ACADVL-209ENST00000578033 SOGA1O94964 1423 aa30.54■■■□□ 2.48
ACADVL-209ENST00000578033 TARBP1Q13395 1621 aaKnown RBP30.5■■■□□ 2.47
ACADVL-209ENST00000578033 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
ACADVL-209ENST00000578033 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
ACADVL-209ENST00000578033 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
ACADVL-209ENST00000578033 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
ACADVL-209ENST00000578033 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.45
ACADVL-209ENST00000578033 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.45
ACADVL-209ENST00000578033 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
ACADVL-209ENST00000578033 ABCA10Q8WWZ4 1543 aa30.31■■■□□ 2.44
ACADVL-209ENST00000578033 EIF4G3O43432 1585 aaKnown RBP30.28■■■□□ 2.44
ACADVL-209ENST00000578033 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
ACADVL-209ENST00000578033 ABCA5Q8WWZ7 1642 aa30.16■■■□□ 2.42
ACADVL-209ENST00000578033 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
ACADVL-209ENST00000578033 PBRM1Q86U86 1689 aa30.06■■■□□ 2.4
ACADVL-209ENST00000578033 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
ACADVL-209ENST00000578033 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
ACADVL-209ENST00000578033 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
ACADVL-209ENST00000578033 IGF1RP08069 1367 aa29.97■■■□□ 2.39
ACADVL-209ENST00000578033 FAM9AQ8IZU1 332 aaPredicted RBP29.95■■■□□ 2.39
ACADVL-209ENST00000578033 ERICH3Q5RHP9 1530 aa29.91■■■□□ 2.38
ACADVL-209ENST00000578033 FBLN2P98095 1184 aa29.91■■■□□ 2.38
ACADVL-209ENST00000578033 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.38
ACADVL-209ENST00000578033 ADAMTS12P58397 1594 aa29.84■■■□□ 2.37
ACADVL-209ENST00000578033 CHD1O14646 1710 aa29.84■■■□□ 2.37
ACADVL-209ENST00000578033 CHMP7Q8WUX9 453 aaPredicted RBP29.82■■■□□ 2.36
ACADVL-209ENST00000578033 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
ACADVL-209ENST00000578033 FHAD1B1AJZ9 1412 aa29.79■■■□□ 2.36
ACADVL-209ENST00000578033 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
ACADVL-209ENST00000578033 CSRNP3Q8WYN3 585 aa29.76■■■□□ 2.35
ACADVL-209ENST00000578033 CUL7Q14999 1698 aa29.71■■■□□ 2.35
ACADVL-209ENST00000578033 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
ACADVL-209ENST00000578033 OSCARQ8IYS5 282 aa29.69■■■□□ 2.34
ACADVL-209ENST00000578033 EEA1Q15075 1411 aa29.69■■■□□ 2.34
ACADVL-209ENST00000578033 PRXQ9BXM0 1461 aa29.63■■■□□ 2.33
ACADVL-209ENST00000578033 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
ACADVL-209ENST00000578033 RAPGEF2Q9Y4G8 1499 aa29.6■■■□□ 2.33
ACADVL-209ENST00000578033 CEP170Q5SW79 1584 aa29.59■■■□□ 2.33
ACADVL-209ENST00000578033 NUP160Q12769 1436 aa29.54■■■□□ 2.32
ACADVL-209ENST00000578033 CLASP1Q7Z460 1538 aa29.48■■■□□ 2.31
ACADVL-209ENST00000578033 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
ACADVL-209ENST00000578033 KIF21BO75037 1637 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms