RNA–Protein interactions for RNA: ENST00000577958.1

UBB-206, Transcript of ubiquitin B, humanhuman

TSL 2

Gene UBB, Length 376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-206ENST00000577958 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
UBB-206ENST00000577958 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
UBB-206ENST00000577958 ABCC9O60706 1549 aa34.03■■■■□ 3.04
UBB-206ENST00000577958 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
UBB-206ENST00000577958 NACADO15069 1562 aa32.39■■■□□ 2.78
UBB-206ENST00000577958 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
UBB-206ENST00000577958 MYO15BQ96JP2 1530 aa32.06■■■□□ 2.72
UBB-206ENST00000577958 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
UBB-206ENST00000577958 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
UBB-206ENST00000577958 DNAJC5BQ9UF47 199 aa31.76■■■□□ 2.67
UBB-206ENST00000577958 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.67
UBB-206ENST00000577958 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
UBB-206ENST00000577958 BICRAQ9NZM4 1560 aa31.58■■■□□ 2.65
UBB-206ENST00000577958 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
UBB-206ENST00000577958 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
UBB-206ENST00000577958 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
UBB-206ENST00000577958 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
UBB-206ENST00000577958 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
UBB-206ENST00000577958 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
UBB-206ENST00000577958 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
UBB-206ENST00000577958 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
UBB-206ENST00000577958 SMARCA2P51531 1590 aa29.75■■■□□ 2.35
UBB-206ENST00000577958 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
UBB-206ENST00000577958 HMGXB3Q12766 1538 aa29.7■■■□□ 2.34
UBB-206ENST00000577958 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
UBB-206ENST00000577958 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
UBB-206ENST00000577958 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
UBB-206ENST00000577958 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
UBB-206ENST00000577958 CUX2O14529 1486 aa29.33■■■□□ 2.29
UBB-206ENST00000577958 NESP48681 1621 aa29.29■■■□□ 2.28
UBB-206ENST00000577958 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
UBB-206ENST00000577958 WIZO95785 1651 aa29.12■■■□□ 2.25
UBB-206ENST00000577958 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
UBB-206ENST00000577958 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
UBB-206ENST00000577958 PDS5BQ9NTI5 1447 aa29■■■□□ 2.23
UBB-206ENST00000577958 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
UBB-206ENST00000577958 KIF21AQ7Z4S6 1674 aa28.95■■■□□ 2.22
UBB-206ENST00000577958 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
UBB-206ENST00000577958 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
UBB-206ENST00000577958 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
UBB-206ENST00000577958 CFTRP13569 1480 aa28.7■■■□□ 2.18
UBB-206ENST00000577958 WDR62O43379 1518 aa28.67■■■□□ 2.18
UBB-206ENST00000577958 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
UBB-206ENST00000577958 FANCD2Q9BXW9 1451 aa28.63■■■□□ 2.17
UBB-206ENST00000577958 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
UBB-206ENST00000577958 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
UBB-206ENST00000577958 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
UBB-206ENST00000577958 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
UBB-206ENST00000577958 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
UBB-206ENST00000577958 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
UBB-206ENST00000577958 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
UBB-206ENST00000577958 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
UBB-206ENST00000577958 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
UBB-206ENST00000577958 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
UBB-206ENST00000577958 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
UBB-206ENST00000577958 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
UBB-206ENST00000577958 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
UBB-206ENST00000577958 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.033e-9■■□□□ 14.5
UBB-206ENST00000577958 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
UBB-206ENST00000577958 SOGA1O94964 1423 aa27.7■■■□□ 2.03
UBB-206ENST00000577958 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.02
UBB-206ENST00000577958 CUX1P39880 1505 aa27.68■■■□□ 2.02
UBB-206ENST00000577958 FGD5Q6ZNL6 1462 aa27.68■■■□□ 2.02
UBB-206ENST00000577958 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
UBB-206ENST00000577958 CHD1O14646 1710 aa27.6■■■□□ 2.01
UBB-206ENST00000577958 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
UBB-206ENST00000577958 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
UBB-206ENST00000577958 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
UBB-206ENST00000577958 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
UBB-206ENST00000577958 ARHGEF11O15085 1522 aa27.54■■■□□ 2
UBB-206ENST00000577958 FBLN2P98095 1184 aa27.48■■□□□ 1.99
UBB-206ENST00000577958 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
UBB-206ENST00000577958 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
UBB-206ENST00000577958 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
UBB-206ENST00000577958 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
UBB-206ENST00000577958 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
UBB-206ENST00000577958 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
UBB-206ENST00000577958 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
UBB-206ENST00000577958 PBRM1Q86U86 1689 aa27.35■■□□□ 1.97
UBB-206ENST00000577958 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
UBB-206ENST00000577958 CLASP1Q7Z460 1538 aa27.32■■□□□ 1.96
UBB-206ENST00000577958 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
UBB-206ENST00000577958 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
UBB-206ENST00000577958 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
UBB-206ENST00000577958 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
UBB-206ENST00000577958 CYB5RLQ6IPT4 315 aa27.28■■□□□ 1.96
UBB-206ENST00000577958 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
UBB-206ENST00000577958 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
UBB-206ENST00000577958 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
UBB-206ENST00000577958 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
UBB-206ENST00000577958 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
UBB-206ENST00000577958 NUP160Q12769 1436 aa27.03■■□□□ 1.92
UBB-206ENST00000577958 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
UBB-206ENST00000577958 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
UBB-206ENST00000577958 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
UBB-206ENST00000577958 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
UBB-206ENST00000577958 KIF27Q86VH2 1401 aa26.78■■□□□ 1.88
UBB-206ENST00000577958 IGF1RP08069 1367 aa26.75■■□□□ 1.87
UBB-206ENST00000577958 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
UBB-206ENST00000577958 JPH4Q96JJ6 628 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms