RNA–Protein interactions for RNA: ENST00000577770.1

BPTF-209, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-209ENST00000577770 NISCHQ9Y2I1 1504 aa11.28□□□□□ -0.6
BPTF-209ENST00000577770 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
BPTF-209ENST00000577770 ABCC9O60706 1549 aa9.5□□□□□ -0.89
BPTF-209ENST00000577770 ZCCHC6Q5VYS8 1495 aaKnown RBP9.46□□□□□ -0.9
BPTF-209ENST00000577770 DCAF1Q9Y4B6 1507 aa9.41□□□□□ -0.9
BPTF-209ENST00000577770 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.91
BPTF-209ENST00000577770 NACADO15069 1562 aa9.37□□□□□ -0.91
BPTF-209ENST00000577770 RB1CC1Q8TDY2 1594 aa9.35□□□□□ -0.91
BPTF-209ENST00000577770 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
BPTF-209ENST00000577770 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
BPTF-209ENST00000577770 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
BPTF-209ENST00000577770 SHROOM4Q9ULL8 1493 aa9.05□□□□□ -0.96
BPTF-209ENST00000577770 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
BPTF-209ENST00000577770 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
BPTF-209ENST00000577770 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
BPTF-209ENST00000577770 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
BPTF-209ENST00000577770 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
BPTF-209ENST00000577770 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
BPTF-209ENST00000577770 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
BPTF-209ENST00000577770 CECR2Q9BXF3 1484 aa8.67□□□□□ -1.02
BPTF-209ENST00000577770 CC2D2AQ9P2K1 1620 aa8.66□□□□□ -1.02
BPTF-209ENST00000577770 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
BPTF-209ENST00000577770 AEBP2Q6ZN18 517 aaPredicted RBP8.65□□□□□ -1.02
BPTF-209ENST00000577770 HMGXB3Q12766 1538 aa8.64□□□□□ -1.03
BPTF-209ENST00000577770 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
BPTF-209ENST00000577770 WIZO95785 1651 aa8.6□□□□□ -1.03
BPTF-209ENST00000577770 ATAD2BQ9ULI0 1458 aa8.59□□□□□ -1.03
BPTF-209ENST00000577770 BAZ1BQ9UIG0 1483 aaKnown RBP8.58□□□□□ -1.04
BPTF-209ENST00000577770 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
BPTF-209ENST00000577770 TOP2AP11388 1531 aaKnown RBP8.57□□□□□ -1.04
BPTF-209ENST00000577770 CHIC1Q5VXU3 224 aa8.46□□□□□ -1.06
BPTF-209ENST00000577770 PRDM2Q13029 1718 aa8.46□□□□□ -1.06
BPTF-209ENST00000577770 SUPT5HO00267 1087 aaKnown RBP8.45□□□□□ -1.06
BPTF-209ENST00000577770 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.06
BPTF-209ENST00000577770 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
BPTF-209ENST00000577770 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
BPTF-209ENST00000577770 CFTRP13569 1480 aa8.32□□□□□ -1.08
BPTF-209ENST00000577770 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
BPTF-209ENST00000577770 KIF21AQ7Z4S6 1674 aa8.29□□□□□ -1.08
BPTF-209ENST00000577770 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
BPTF-209ENST00000577770 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
BPTF-209ENST00000577770 NESP48681 1621 aa8.25□□□□□ -1.09
BPTF-209ENST00000577770 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
BPTF-209ENST00000577770 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
BPTF-209ENST00000577770 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
BPTF-209ENST00000577770 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
BPTF-209ENST00000577770 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
BPTF-209ENST00000577770 BIVM-ERCC5R4GMW8 1640 aa8.2□□□□□ -1.1
BPTF-209ENST00000577770 MRC2Q9UBG0 1479 aa8.19□□□□□ -1.1
BPTF-209ENST00000577770 WDR62O43379 1518 aa8.18□□□□□ -1.1
BPTF-209ENST00000577770 TOP2BQ02880 1626 aa8.18□□□□□ -1.1
BPTF-209ENST00000577770 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
BPTF-209ENST00000577770 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
BPTF-209ENST00000577770 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
BPTF-209ENST00000577770 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
BPTF-209ENST00000577770 CUX1P39880 1505 aa8.13□□□□□ -1.11
BPTF-209ENST00000577770 CUX2O14529 1486 aa8.13□□□□□ -1.11
BPTF-209ENST00000577770 WDR97A6NE52 1622 aa8.12□□□□□ -1.11
BPTF-209ENST00000577770 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
BPTF-209ENST00000577770 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
BPTF-209ENST00000577770 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
BPTF-209ENST00000577770 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
BPTF-209ENST00000577770 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
BPTF-209ENST00000577770 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
BPTF-209ENST00000577770 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
BPTF-209ENST00000577770 ABCA5Q8WWZ7 1642 aa8.03□□□□□ -1.12
BPTF-209ENST00000577770 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
BPTF-209ENST00000577770 SOGA1O94964 1423 aa8.01□□□□□ -1.13
BPTF-209ENST00000577770 EEA1Q15075 1411 aa8.01□□□□□ -1.13
BPTF-209ENST00000577770 CUL7Q14999 1698 aa8□□□□□ -1.13
BPTF-209ENST00000577770 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
BPTF-209ENST00000577770 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
BPTF-209ENST00000577770 RAD54L2Q9Y4B4 1467 aa7.97□□□□□ -1.13
BPTF-209ENST00000577770 GAPVD1Q14C86 1478 aa7.96□□□□□ -1.13
BPTF-209ENST00000577770 GRIN2BQ13224 1484 aa7.95□□□□□ -1.14
BPTF-209ENST00000577770 MAGI1Q96QZ7 1491 aaPredicted RBP7.94□□□□□ -1.14
BPTF-209ENST00000577770 ZNF608Q9ULD9 1512 aaPredicted RBP7.93□□□□□ -1.14
BPTF-209ENST00000577770 ADAMTS12P58397 1594 aa7.93□□□□□ -1.14
BPTF-209ENST00000577770 KIF21BO75037 1637 aa7.92□□□□□ -1.14
BPTF-209ENST00000577770 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
BPTF-209ENST00000577770 CHD1O14646 1710 aa7.9□□□□□ -1.14
BPTF-209ENST00000577770 CTTNBP2Q8WZ74 1663 aa7.89□□□□□ -1.15
BPTF-209ENST00000577770 SYNJ2O15056 1496 aa7.89□□□□□ -1.15
BPTF-209ENST00000577770 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
BPTF-209ENST00000577770 SNAPC4Q5SXM2 1469 aa7.89□□□□□ -1.15
BPTF-209ENST00000577770 FHAD1B1AJZ9 1412 aa7.88□□□□□ -1.15
BPTF-209ENST00000577770 RAPGEF2Q9Y4G8 1499 aa7.86□□□□□ -1.15
BPTF-209ENST00000577770 RUSC2Q8N2Y8 1516 aa7.85□□□□□ -1.15
BPTF-209ENST00000577770 GOLGA3Q08378 1498 aa7.85□□□□□ -1.15
BPTF-209ENST00000577770 GRIN2AQ12879 1464 aa7.85□□□□□ -1.15
BPTF-209ENST00000577770 PRXQ9BXM0 1461 aa7.85□□□□□ -1.15
BPTF-209ENST00000577770 IGF1RP08069 1367 aa7.84□□□□□ -1.15
BPTF-209ENST00000577770 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.16
BPTF-209ENST00000577770 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
BPTF-209ENST00000577770 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
BPTF-209ENST00000577770 CHMP7Q8WUX9 453 aaPredicted RBP7.8□□□□□ -1.16
BPTF-209ENST00000577770 CEP170Q5SW79 1584 aa7.8□□□□□ -1.16
BPTF-209ENST00000577770 NUP160Q12769 1436 aa7.78□□□□□ -1.16
BPTF-209ENST00000577770 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
BPTF-209ENST00000577770 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms