RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
SMARCE1-212ENST00000577721 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
SMARCE1-212ENST00000577721 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
SMARCE1-212ENST00000577721 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
SMARCE1-212ENST00000577721 FOXD1Q16676 465 aa20.59■□□□□ 0.89
SMARCE1-212ENST00000577721 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
SMARCE1-212ENST00000577721 MSH5O43196 834 aa19.64■□□□□ 0.73
SMARCE1-212ENST00000577721 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-212ENST00000577721 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
SMARCE1-212ENST00000577721 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SMARCE1-212ENST00000577721 ADRA2BP18089 450 aa18.63■□□□□ 0.57
SMARCE1-212ENST00000577721 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
SMARCE1-212ENST00000577721 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
SMARCE1-212ENST00000577721 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
SMARCE1-212ENST00000577721 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
SMARCE1-212ENST00000577721 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
SMARCE1-212ENST00000577721 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
SMARCE1-212ENST00000577721 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
SMARCE1-212ENST00000577721 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-212ENST00000577721 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-212ENST00000577721 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SMARCE1-212ENST00000577721 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
SMARCE1-212ENST00000577721 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
SMARCE1-212ENST00000577721 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
SMARCE1-212ENST00000577721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.128e-9■■□□□ 11.5
SMARCE1-212ENST00000577721 POTEHQ6S545 545 aa15.76■□□□□ 0.11
SMARCE1-212ENST00000577721 ABCC9O60706 1549 aa15.67■□□□□ 0.1
SMARCE1-212ENST00000577721 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-212ENST00000577721 CAPN15O75808 1086 aa15.34■□□□□ 0.05
SMARCE1-212ENST00000577721 DSG3P32926 999 aa15.34■□□□□ 0.05
SMARCE1-212ENST00000577721 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
SMARCE1-212ENST00000577721 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-212ENST00000577721 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
SMARCE1-212ENST00000577721 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-212ENST00000577721 APLP2Q06481 763 aa14.94□□□□□ -0.02
SMARCE1-212ENST00000577721 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-212ENST00000577721 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
SMARCE1-212ENST00000577721 ABCB7O75027 752 aa14.88□□□□□ -0.03
SMARCE1-212ENST00000577721 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
SMARCE1-212ENST00000577721 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-212ENST00000577721 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
SMARCE1-212ENST00000577721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-212ENST00000577721 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-212ENST00000577721 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
SMARCE1-212ENST00000577721 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMARCE1-212ENST00000577721 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
SMARCE1-212ENST00000577721 NACADO15069 1562 aa14.6□□□□□ -0.07
SMARCE1-212ENST00000577721 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-212ENST00000577721 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
SMARCE1-212ENST00000577721 POLA2Q14181 598 aa14.35□□□□□ -0.11
SMARCE1-212ENST00000577721 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
SMARCE1-212ENST00000577721 KCNA4P22459 653 aa14.3□□□□□ -0.12
SMARCE1-212ENST00000577721 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
SMARCE1-212ENST00000577721 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.13
SMARCE1-212ENST00000577721 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
SMARCE1-212ENST00000577721 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-212ENST00000577721 HAX1O00165 279 aa14.12□□□□□ -0.15
SMARCE1-212ENST00000577721 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
SMARCE1-212ENST00000577721 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
SMARCE1-212ENST00000577721 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-212ENST00000577721 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-212ENST00000577721 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
SMARCE1-212ENST00000577721 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
SMARCE1-212ENST00000577721 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
SMARCE1-212ENST00000577721 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-212ENST00000577721 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
SMARCE1-212ENST00000577721 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-212ENST00000577721 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCE1-212ENST00000577721 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
SMARCE1-212ENST00000577721 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
SMARCE1-212ENST00000577721 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
SMARCE1-212ENST00000577721 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-212ENST00000577721 EVX2Q03828 476 aa13.75□□□□□ -0.21
SMARCE1-212ENST00000577721 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
SMARCE1-212ENST00000577721 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-212ENST00000577721 LHX8Q68G74 356 aa13.57□□□□□ -0.24
SMARCE1-212ENST00000577721 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
SMARCE1-212ENST00000577721 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
SMARCE1-212ENST00000577721 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
SMARCE1-212ENST00000577721 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
SMARCE1-212ENST00000577721 CUX2O14529 1486 aa13.52□□□□□ -0.25
SMARCE1-212ENST00000577721 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
SMARCE1-212ENST00000577721 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
SMARCE1-212ENST00000577721 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
SMARCE1-212ENST00000577721 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-212ENST00000577721 GABBR2O75899 941 aa13.48□□□□□ -0.25
SMARCE1-212ENST00000577721 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
SMARCE1-212ENST00000577721 FBLN2P98095 1184 aa13.44□□□□□ -0.26
SMARCE1-212ENST00000577721 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-212ENST00000577721 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
SMARCE1-212ENST00000577721 NESP48681 1621 aa13.38□□□□□ -0.27
SMARCE1-212ENST00000577721 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
SMARCE1-212ENST00000577721 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-212ENST00000577721 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
SMARCE1-212ENST00000577721 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
SMARCE1-212ENST00000577721 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-212ENST00000577721 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
SMARCE1-212ENST00000577721 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-212ENST00000577721 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
SMARCE1-212ENST00000577721 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms