RNA–Protein interactions for RNA: ENST00000577556.1

AC005552.1-201, humanhuman

BASIC

Gene AC005552.1, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005552.1-201ENST00000577556 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
AC005552.1-201ENST00000577556 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
AC005552.1-201ENST00000577556 ABCC9O60706 1549 aa18.91■□□□□ 0.62
AC005552.1-201ENST00000577556 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
AC005552.1-201ENST00000577556 NACADO15069 1562 aa18.05■□□□□ 0.48
AC005552.1-201ENST00000577556 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
AC005552.1-201ENST00000577556 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
AC005552.1-201ENST00000577556 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
AC005552.1-201ENST00000577556 DCAF1Q9Y4B6 1507 aa17.75■□□□□ 0.43
AC005552.1-201ENST00000577556 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
AC005552.1-201ENST00000577556 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
AC005552.1-201ENST00000577556 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
AC005552.1-201ENST00000577556 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
AC005552.1-201ENST00000577556 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
AC005552.1-201ENST00000577556 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
AC005552.1-201ENST00000577556 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
AC005552.1-201ENST00000577556 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
AC005552.1-201ENST00000577556 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
AC005552.1-201ENST00000577556 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
AC005552.1-201ENST00000577556 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
AC005552.1-201ENST00000577556 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
AC005552.1-201ENST00000577556 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
AC005552.1-201ENST00000577556 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
AC005552.1-201ENST00000577556 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
AC005552.1-201ENST00000577556 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
AC005552.1-201ENST00000577556 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
AC005552.1-201ENST00000577556 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
AC005552.1-201ENST00000577556 NESP48681 1621 aa16.3■□□□□ 0.2
AC005552.1-201ENST00000577556 CUX2O14529 1486 aa16.29■□□□□ 0.2
AC005552.1-201ENST00000577556 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
AC005552.1-201ENST00000577556 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
AC005552.1-201ENST00000577556 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
AC005552.1-201ENST00000577556 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
AC005552.1-201ENST00000577556 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
AC005552.1-201ENST00000577556 WIZO95785 1651 aa16.2■□□□□ 0.18
AC005552.1-201ENST00000577556 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
AC005552.1-201ENST00000577556 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
AC005552.1-201ENST00000577556 CFTRP13569 1480 aa16.06■□□□□ 0.16
AC005552.1-201ENST00000577556 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
AC005552.1-201ENST00000577556 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
AC005552.1-201ENST00000577556 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
AC005552.1-201ENST00000577556 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
AC005552.1-201ENST00000577556 WDR62O43379 1518 aa15.94■□□□□ 0.14
AC005552.1-201ENST00000577556 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
AC005552.1-201ENST00000577556 CEP164Q9UPV0 1460 aa15.92■□□□□ 0.14
AC005552.1-201ENST00000577556 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
AC005552.1-201ENST00000577556 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
AC005552.1-201ENST00000577556 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
AC005552.1-201ENST00000577556 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
AC005552.1-201ENST00000577556 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
AC005552.1-201ENST00000577556 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
AC005552.1-201ENST00000577556 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
AC005552.1-201ENST00000577556 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
AC005552.1-201ENST00000577556 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
AC005552.1-201ENST00000577556 SUPT5HO00267 1087 aaKnown RBP15.53■□□□□ 0.08
AC005552.1-201ENST00000577556 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
AC005552.1-201ENST00000577556 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
AC005552.1-201ENST00000577556 SOGA1O94964 1423 aa15.5■□□□□ 0.07
AC005552.1-201ENST00000577556 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
AC005552.1-201ENST00000577556 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
AC005552.1-201ENST00000577556 CUX1P39880 1505 aa15.45■□□□□ 0.06
AC005552.1-201ENST00000577556 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
AC005552.1-201ENST00000577556 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
AC005552.1-201ENST00000577556 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
AC005552.1-201ENST00000577556 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
AC005552.1-201ENST00000577556 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
AC005552.1-201ENST00000577556 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
AC005552.1-201ENST00000577556 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
AC005552.1-201ENST00000577556 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
AC005552.1-201ENST00000577556 FBLN2P98095 1184 aa15.29■□□□□ 0.04
AC005552.1-201ENST00000577556 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
AC005552.1-201ENST00000577556 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
AC005552.1-201ENST00000577556 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.04
AC005552.1-201ENST00000577556 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
AC005552.1-201ENST00000577556 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
AC005552.1-201ENST00000577556 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
AC005552.1-201ENST00000577556 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
AC005552.1-201ENST00000577556 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
AC005552.1-201ENST00000577556 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
AC005552.1-201ENST00000577556 CHD1O14646 1710 aa15.23■□□□□ 0.03
AC005552.1-201ENST00000577556 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
AC005552.1-201ENST00000577556 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
AC005552.1-201ENST00000577556 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
AC005552.1-201ENST00000577556 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
AC005552.1-201ENST00000577556 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
AC005552.1-201ENST00000577556 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
AC005552.1-201ENST00000577556 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
AC005552.1-201ENST00000577556 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
AC005552.1-201ENST00000577556 NUP160Q12769 1436 aa15.11■□□□□ 0.01
AC005552.1-201ENST00000577556 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
AC005552.1-201ENST00000577556 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
AC005552.1-201ENST00000577556 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
AC005552.1-201ENST00000577556 IGF1RP08069 1367 aa15.05■□□□□ -0
AC005552.1-201ENST00000577556 ADAMTS12P58397 1594 aa15.04■□□□□ -0
AC005552.1-201ENST00000577556 CEP170Q5SW79 1584 aa15□□□□□ -0.01
AC005552.1-201ENST00000577556 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
AC005552.1-201ENST00000577556 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
AC005552.1-201ENST00000577556 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
AC005552.1-201ENST00000577556 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
AC005552.1-201ENST00000577556 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms