RNA–Protein interactions for RNA: ENST00000577079.5

RPH3AL-221, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 3

Gene RPH3AL, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-221ENST00000577079 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
RPH3AL-221ENST00000577079 CCDC180Q9P1Z9 1646 aa36.44■■■■□ 3.42
RPH3AL-221ENST00000577079 ABCC9O60706 1549 aa35.81■■■■□ 3.32
RPH3AL-221ENST00000577079 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
RPH3AL-221ENST00000577079 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
RPH3AL-221ENST00000577079 NACADO15069 1562 aa34.33■■■■□ 3.09
RPH3AL-221ENST00000577079 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
RPH3AL-221ENST00000577079 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
RPH3AL-221ENST00000577079 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
RPH3AL-221ENST00000577079 UNC13AQ9UPW8 1703 aa33.48■■■□□ 2.95
RPH3AL-221ENST00000577079 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.95
RPH3AL-221ENST00000577079 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
RPH3AL-221ENST00000577079 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
RPH3AL-221ENST00000577079 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
RPH3AL-221ENST00000577079 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
RPH3AL-221ENST00000577079 EIF4G1Q04637 1599 aaKnown RBP32.46■■■□□ 2.79
RPH3AL-221ENST00000577079 CC2D2AQ9P2K1 1620 aa32.36■■■□□ 2.77
RPH3AL-221ENST00000577079 CECR2Q9BXF3 1484 aa32.22■■■□□ 2.75
RPH3AL-221ENST00000577079 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
RPH3AL-221ENST00000577079 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
RPH3AL-221ENST00000577079 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
RPH3AL-221ENST00000577079 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
RPH3AL-221ENST00000577079 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
RPH3AL-221ENST00000577079 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
RPH3AL-221ENST00000577079 HMGXB3Q12766 1538 aa31.5■■■□□ 2.63
RPH3AL-221ENST00000577079 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
RPH3AL-221ENST00000577079 BAZ1BQ9UIG0 1483 aaKnown RBP31.43■■■□□ 2.62
RPH3AL-221ENST00000577079 WIZO95785 1651 aa31.15■■■□□ 2.58
RPH3AL-221ENST00000577079 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
RPH3AL-221ENST00000577079 ERCC6Q03468 1493 aa30.95■■■□□ 2.54
RPH3AL-221ENST00000577079 NESP48681 1621 aa30.91■■■□□ 2.54
RPH3AL-221ENST00000577079 TOP2AP11388 1531 aaKnown RBP30.87■■■□□ 2.53
RPH3AL-221ENST00000577079 LAMC3Q9Y6N6 1575 aa30.86■■■□□ 2.53
RPH3AL-221ENST00000577079 CADPSQ9ULU8 1353 aa30.76■■■□□ 2.51
RPH3AL-221ENST00000577079 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
RPH3AL-221ENST00000577079 CUX2O14529 1486 aa30.63■■■□□ 2.49
RPH3AL-221ENST00000577079 CFTRP13569 1480 aa30.53■■■□□ 2.48
RPH3AL-221ENST00000577079 KIF21AQ7Z4S6 1674 aa30.51■■■□□ 2.47
RPH3AL-221ENST00000577079 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
RPH3AL-221ENST00000577079 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
RPH3AL-221ENST00000577079 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
RPH3AL-221ENST00000577079 CEP164Q9UPV0 1460 aa30.39■■■□□ 2.46
RPH3AL-221ENST00000577079 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
RPH3AL-221ENST00000577079 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
RPH3AL-221ENST00000577079 WDR62O43379 1518 aa30.25■■■□□ 2.43
RPH3AL-221ENST00000577079 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
RPH3AL-221ENST00000577079 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
RPH3AL-221ENST00000577079 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
RPH3AL-221ENST00000577079 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
RPH3AL-221ENST00000577079 DNAJC5Q9H3Z4 198 aa29.84■■■□□ 2.37
RPH3AL-221ENST00000577079 DNMBPQ6XZF7 1577 aa29.84■■■□□ 2.37
RPH3AL-221ENST00000577079 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
RPH3AL-221ENST00000577079 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
RPH3AL-221ENST00000577079 CUX1P39880 1505 aa29.58■■■□□ 2.33
RPH3AL-221ENST00000577079 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
RPH3AL-221ENST00000577079 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
RPH3AL-221ENST00000577079 SOGA1O94964 1423 aa29.53■■■□□ 2.32
RPH3AL-221ENST00000577079 TARBP1Q13395 1621 aaKnown RBP29.52■■■□□ 2.32
RPH3AL-221ENST00000577079 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
RPH3AL-221ENST00000577079 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
RPH3AL-221ENST00000577079 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.3
RPH3AL-221ENST00000577079 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
RPH3AL-221ENST00000577079 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
RPH3AL-221ENST00000577079 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
RPH3AL-221ENST00000577079 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
RPH3AL-221ENST00000577079 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
RPH3AL-221ENST00000577079 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
RPH3AL-221ENST00000577079 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
RPH3AL-221ENST00000577079 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
RPH3AL-221ENST00000577079 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
RPH3AL-221ENST00000577079 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
RPH3AL-221ENST00000577079 FBLN2P98095 1184 aa29.17■■■□□ 2.26
RPH3AL-221ENST00000577079 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
RPH3AL-221ENST00000577079 MAGI1Q96QZ7 1491 aaPredicted RBP29.14■■■□□ 2.26
RPH3AL-221ENST00000577079 ABCA5Q8WWZ7 1642 aa29.1■■■□□ 2.25
RPH3AL-221ENST00000577079 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
RPH3AL-221ENST00000577079 CHD1O14646 1710 aa29.08■■■□□ 2.25
RPH3AL-221ENST00000577079 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
RPH3AL-221ENST00000577079 SYNJ2O15056 1496 aa29.03■■■□□ 2.24
RPH3AL-221ENST00000577079 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
RPH3AL-221ENST00000577079 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
RPH3AL-221ENST00000577079 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
RPH3AL-221ENST00000577079 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
RPH3AL-221ENST00000577079 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
RPH3AL-221ENST00000577079 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
RPH3AL-221ENST00000577079 RIMBP3CA6NJZ7 1639 aa28.82■■■□□ 2.2
RPH3AL-221ENST00000577079 RIMBP3BA6NNM3 1639 aa28.82■■■□□ 2.2
RPH3AL-221ENST00000577079 RIMBP3Q9UFD9 1639 aa28.82■■■□□ 2.2
RPH3AL-221ENST00000577079 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
RPH3AL-221ENST00000577079 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
RPH3AL-221ENST00000577079 NUP160Q12769 1436 aa28.68■■■□□ 2.18
RPH3AL-221ENST00000577079 IGF1RP08069 1367 aa28.67■■■□□ 2.18
RPH3AL-221ENST00000577079 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
RPH3AL-221ENST00000577079 CYB5RLQ6IPT4 315 aa28.62■■■□□ 2.17
RPH3AL-221ENST00000577079 CUL7Q14999 1698 aa28.61■■■□□ 2.17
RPH3AL-221ENST00000577079 ARAP1Q96P48 1450 aa28.58■■■□□ 2.17
RPH3AL-221ENST00000577079 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
RPH3AL-221ENST00000577079 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
RPH3AL-221ENST00000577079 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
RPH3AL-221ENST00000577079 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms