RNA–Protein interactions for RNA: ENST00000577028.5

EDC4-213, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-213ENST00000577028 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
EDC4-213ENST00000577028 CCDC180Q9P1Z9 1646 aa38.28■■■■□ 3.72
EDC4-213ENST00000577028 ABCC9O60706 1549 aa37.7■■■■□ 3.63
EDC4-213ENST00000577028 RB1CC1Q8TDY2 1594 aa36.13■■■■□ 3.37
EDC4-213ENST00000577028 NACADO15069 1562 aa35.96■■■■□ 3.35
EDC4-213ENST00000577028 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
EDC4-213ENST00000577028 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
EDC4-213ENST00000577028 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
EDC4-213ENST00000577028 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
EDC4-213ENST00000577028 DCAF1Q9Y4B6 1507 aa35.33■■■■□ 3.25
EDC4-213ENST00000577028 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
EDC4-213ENST00000577028 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
EDC4-213ENST00000577028 SCRIBQ14160 1630 aa34.98■■■■□ 3.19
EDC4-213ENST00000577028 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
EDC4-213ENST00000577028 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
EDC4-213ENST00000577028 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
EDC4-213ENST00000577028 CC2D2AQ9P2K1 1620 aa34.1■■■■□ 3.05
EDC4-213ENST00000577028 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
EDC4-213ENST00000577028 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
EDC4-213ENST00000577028 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
EDC4-213ENST00000577028 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
EDC4-213ENST00000577028 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
EDC4-213ENST00000577028 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
EDC4-213ENST00000577028 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
EDC4-213ENST00000577028 MROH2BQ7Z745 1585 aa33.01■■■□□ 2.88
EDC4-213ENST00000577028 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
EDC4-213ENST00000577028 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
EDC4-213ENST00000577028 WIZO95785 1651 aa32.74■■■□□ 2.83
EDC4-213ENST00000577028 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
EDC4-213ENST00000577028 NESP48681 1621 aa32.53■■■□□ 2.8
EDC4-213ENST00000577028 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
EDC4-213ENST00000577028 LAMC3Q9Y6N6 1575 aa32.4■■■□□ 2.78
EDC4-213ENST00000577028 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
EDC4-213ENST00000577028 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
EDC4-213ENST00000577028 CUX2O14529 1486 aa32.19■■■□□ 2.74
EDC4-213ENST00000577028 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
EDC4-213ENST00000577028 THOC2Q8NI27 1593 aaKnown RBP32.14■■■□□ 2.74
EDC4-213ENST00000577028 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
EDC4-213ENST00000577028 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
EDC4-213ENST00000577028 CFTRP13569 1480 aa31.91■■■□□ 2.7
EDC4-213ENST00000577028 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
EDC4-213ENST00000577028 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
EDC4-213ENST00000577028 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
EDC4-213ENST00000577028 MRC2Q9UBG0 1479 aa31.86■■■□□ 2.69
EDC4-213ENST00000577028 WDR62O43379 1518 aa31.76■■■□□ 2.68
EDC4-213ENST00000577028 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
EDC4-213ENST00000577028 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
EDC4-213ENST00000577028 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
EDC4-213ENST00000577028 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
EDC4-213ENST00000577028 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
EDC4-213ENST00000577028 ABCC8Q09428 1581 aa31.25■■■□□ 2.59
EDC4-213ENST00000577028 IFT140Q96RY7 1462 aa31.16■■■□□ 2.58
EDC4-213ENST00000577028 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
EDC4-213ENST00000577028 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
EDC4-213ENST00000577028 POLA1P09884 1462 aaPredicted RBP31.03■■■□□ 2.56
EDC4-213ENST00000577028 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
EDC4-213ENST00000577028 CUX1P39880 1505 aa30.99■■■□□ 2.55
EDC4-213ENST00000577028 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
EDC4-213ENST00000577028 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
EDC4-213ENST00000577028 SOGA1O94964 1423 aa30.87■■■□□ 2.53
EDC4-213ENST00000577028 AQRO60306 1485 aaKnown RBP eCLIP30.85■■■□□ 2.53
EDC4-213ENST00000577028 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
EDC4-213ENST00000577028 CHD1O14646 1710 aa30.78■■■□□ 2.52
EDC4-213ENST00000577028 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
EDC4-213ENST00000577028 TDRD9Q8NDG6 1382 aaKnown RBP30.75■■■□□ 2.51
EDC4-213ENST00000577028 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
EDC4-213ENST00000577028 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
EDC4-213ENST00000577028 TOP2BQ02880 1626 aa30.68■■■□□ 2.5
EDC4-213ENST00000577028 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
EDC4-213ENST00000577028 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
EDC4-213ENST00000577028 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
EDC4-213ENST00000577028 FBLN2P98095 1184 aa30.59■■■□□ 2.49
EDC4-213ENST00000577028 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.49
EDC4-213ENST00000577028 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
EDC4-213ENST00000577028 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
EDC4-213ENST00000577028 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
EDC4-213ENST00000577028 MAGI1Q96QZ7 1491 aaPredicted RBP30.51■■■□□ 2.48
EDC4-213ENST00000577028 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
EDC4-213ENST00000577028 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
EDC4-213ENST00000577028 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
EDC4-213ENST00000577028 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
EDC4-213ENST00000577028 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
EDC4-213ENST00000577028 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
EDC4-213ENST00000577028 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
EDC4-213ENST00000577028 ADAMTS12P58397 1594 aa30.32■■■□□ 2.44
EDC4-213ENST00000577028 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
EDC4-213ENST00000577028 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
EDC4-213ENST00000577028 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
EDC4-213ENST00000577028 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
EDC4-213ENST00000577028 CEP170Q5SW79 1584 aa30.1■■■□□ 2.41
EDC4-213ENST00000577028 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
EDC4-213ENST00000577028 CYB5RLQ6IPT4 315 aa30.05■■■□□ 2.4
EDC4-213ENST00000577028 KIF27Q86VH2 1401 aa30.04■■■□□ 2.4
EDC4-213ENST00000577028 NUP160Q12769 1436 aa30■■■□□ 2.39
EDC4-213ENST00000577028 CUL7Q14999 1698 aa30■■■□□ 2.39
EDC4-213ENST00000577028 SHROOM2Q13796 1616 aa29.89■■■□□ 2.38
EDC4-213ENST00000577028 RUSC2Q8N2Y8 1516 aa29.88■■■□□ 2.37
EDC4-213ENST00000577028 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
EDC4-213ENST00000577028 IGF1RP08069 1367 aa29.87■■■□□ 2.37
EDC4-213ENST00000577028 CARMIL1Q5VZK9 1371 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 320.3 ms