RNA–Protein interactions for RNA: ENST00000575668.1

EIF4A3-204, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 831 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-204ENST00000575668 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
EIF4A3-204ENST00000575668 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
EIF4A3-204ENST00000575668 ABCC9O60706 1549 aa22.98■■□□□ 1.27
EIF4A3-204ENST00000575668 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
EIF4A3-204ENST00000575668 NACADO15069 1562 aa21.9■■□□□ 1.1
EIF4A3-204ENST00000575668 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
EIF4A3-204ENST00000575668 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
EIF4A3-204ENST00000575668 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
EIF4A3-204ENST00000575668 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
EIF4A3-204ENST00000575668 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
EIF4A3-204ENST00000575668 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
EIF4A3-204ENST00000575668 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
EIF4A3-204ENST00000575668 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
EIF4A3-204ENST00000575668 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
EIF4A3-204ENST00000575668 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
EIF4A3-204ENST00000575668 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
EIF4A3-204ENST00000575668 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
EIF4A3-204ENST00000575668 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
EIF4A3-204ENST00000575668 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
EIF4A3-204ENST00000575668 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
EIF4A3-204ENST00000575668 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
EIF4A3-204ENST00000575668 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
EIF4A3-204ENST00000575668 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
EIF4A3-204ENST00000575668 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
EIF4A3-204ENST00000575668 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
EIF4A3-204ENST00000575668 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
EIF4A3-204ENST00000575668 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
EIF4A3-204ENST00000575668 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
EIF4A3-204ENST00000575668 NESP48681 1621 aa19.8■□□□□ 0.76
EIF4A3-204ENST00000575668 WIZO95785 1651 aa19.76■□□□□ 0.75
EIF4A3-204ENST00000575668 CUX2O14529 1486 aa19.75■□□□□ 0.75
EIF4A3-204ENST00000575668 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
EIF4A3-204ENST00000575668 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
EIF4A3-204ENST00000575668 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
EIF4A3-204ENST00000575668 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
EIF4A3-204ENST00000575668 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
EIF4A3-204ENST00000575668 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
EIF4A3-204ENST00000575668 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
EIF4A3-204ENST00000575668 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
EIF4A3-204ENST00000575668 CFTRP13569 1480 aa19.41■□□□□ 0.7
EIF4A3-204ENST00000575668 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
EIF4A3-204ENST00000575668 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
EIF4A3-204ENST00000575668 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
EIF4A3-204ENST00000575668 WDR62O43379 1518 aa19.34■□□□□ 0.69
EIF4A3-204ENST00000575668 CCDC88BA6NC98 1476 aa19.3■□□□□ 0.68
EIF4A3-204ENST00000575668 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
EIF4A3-204ENST00000575668 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
EIF4A3-204ENST00000575668 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
EIF4A3-204ENST00000575668 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
EIF4A3-204ENST00000575668 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
EIF4A3-204ENST00000575668 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
EIF4A3-204ENST00000575668 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
EIF4A3-204ENST00000575668 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
EIF4A3-204ENST00000575668 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
EIF4A3-204ENST00000575668 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
EIF4A3-204ENST00000575668 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
EIF4A3-204ENST00000575668 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
EIF4A3-204ENST00000575668 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.6
EIF4A3-204ENST00000575668 SOGA1O94964 1423 aa18.79■□□□□ 0.6
EIF4A3-204ENST00000575668 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
EIF4A3-204ENST00000575668 CUX1P39880 1505 aa18.75■□□□□ 0.59
EIF4A3-204ENST00000575668 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
EIF4A3-204ENST00000575668 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
EIF4A3-204ENST00000575668 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
EIF4A3-204ENST00000575668 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
EIF4A3-204ENST00000575668 FBLN2P98095 1184 aa18.67■□□□□ 0.58
EIF4A3-204ENST00000575668 CHD1O14646 1710 aa18.66■□□□□ 0.58
EIF4A3-204ENST00000575668 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
EIF4A3-204ENST00000575668 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
EIF4A3-204ENST00000575668 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
EIF4A3-204ENST00000575668 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
EIF4A3-204ENST00000575668 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
EIF4A3-204ENST00000575668 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
EIF4A3-204ENST00000575668 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
EIF4A3-204ENST00000575668 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
EIF4A3-204ENST00000575668 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
EIF4A3-204ENST00000575668 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
EIF4A3-204ENST00000575668 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
EIF4A3-204ENST00000575668 TOP2BQ02880 1626 aa18.53■□□□□ 0.56
EIF4A3-204ENST00000575668 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
EIF4A3-204ENST00000575668 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
EIF4A3-204ENST00000575668 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
EIF4A3-204ENST00000575668 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
EIF4A3-204ENST00000575668 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
EIF4A3-204ENST00000575668 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
EIF4A3-204ENST00000575668 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
EIF4A3-204ENST00000575668 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
EIF4A3-204ENST00000575668 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
EIF4A3-204ENST00000575668 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
EIF4A3-204ENST00000575668 ADAMTS12P58397 1594 aa18.33■□□□□ 0.52
EIF4A3-204ENST00000575668 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
EIF4A3-204ENST00000575668 NUP160Q12769 1436 aa18.27■□□□□ 0.52
EIF4A3-204ENST00000575668 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
EIF4A3-204ENST00000575668 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
EIF4A3-204ENST00000575668 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
EIF4A3-204ENST00000575668 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
EIF4A3-204ENST00000575668 IGF1RP08069 1367 aa18.16■□□□□ 0.5
EIF4A3-204ENST00000575668 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
EIF4A3-204ENST00000575668 JPH4Q96JJ6 628 aa18.14■□□□□ 0.49
EIF4A3-204ENST00000575668 CUL7Q14999 1698 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms