RNA–Protein interactions for RNA: ENST00000575659.5

ACTG1-209, Transcript of actin gamma 1, humanhuman

TSL 3

Gene ACTG1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-209ENST00000575659 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
ACTG1-209ENST00000575659 ABCC9O60706 1549 aa38.34■■■■□ 3.73
ACTG1-209ENST00000575659 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
ACTG1-209ENST00000575659 RB1CC1Q8TDY2 1594 aa36.45■■■■□ 3.43
ACTG1-209ENST00000575659 NACADO15069 1562 aa36.17■■■■□ 3.38
ACTG1-209ENST00000575659 DCAF8L2P0C7V8 631 aa36.11■■■■□ 3.37
ACTG1-209ENST00000575659 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
ACTG1-209ENST00000575659 PABPN1Q86U42 306 aaKnown RBP eCLIP35.72■■■■□ 3.31
ACTG1-209ENST00000575659 MYO15BQ96JP2 1530 aa35.62■■■■□ 3.29
ACTG1-209ENST00000575659 UNC13AQ9UPW8 1703 aa35.59■■■■□ 3.29
ACTG1-209ENST00000575659 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
ACTG1-209ENST00000575659 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
ACTG1-209ENST00000575659 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
ACTG1-209ENST00000575659 SCRIBQ14160 1630 aa34.89■■■■□ 3.18
ACTG1-209ENST00000575659 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
ACTG1-209ENST00000575659 CC2D2AQ9P2K1 1620 aa34.61■■■■□ 3.13
ACTG1-209ENST00000575659 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
ACTG1-209ENST00000575659 EIF4G1Q04637 1599 aaKnown RBP34.51■■■■□ 3.12
ACTG1-209ENST00000575659 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
ACTG1-209ENST00000575659 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
ACTG1-209ENST00000575659 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
ACTG1-209ENST00000575659 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
ACTG1-209ENST00000575659 ERCC6Q03468 1493 aa33.14■■■□□ 2.9
ACTG1-209ENST00000575659 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
ACTG1-209ENST00000575659 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
ACTG1-209ENST00000575659 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
ACTG1-209ENST00000575659 CUX2O14529 1486 aa33.04■■■□□ 2.88
ACTG1-209ENST00000575659 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
ACTG1-209ENST00000575659 NESP48681 1621 aa32.91■■■□□ 2.86
ACTG1-209ENST00000575659 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
ACTG1-209ENST00000575659 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
ACTG1-209ENST00000575659 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
ACTG1-209ENST00000575659 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
ACTG1-209ENST00000575659 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
ACTG1-209ENST00000575659 KIF21AQ7Z4S6 1674 aa32.47■■■□□ 2.79
ACTG1-209ENST00000575659 WIZO95785 1651 aa32.45■■■□□ 2.79
ACTG1-209ENST00000575659 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
ACTG1-209ENST00000575659 MRC2Q9UBG0 1479 aa32.21■■■□□ 2.75
ACTG1-209ENST00000575659 RSF1Q96T23 1441 aaPredicted RBP32.13■■■□□ 2.73
ACTG1-209ENST00000575659 WDR62O43379 1518 aa32.1■■■□□ 2.73
ACTG1-209ENST00000575659 CEP164Q9UPV0 1460 aa32.08■■■□□ 2.73
ACTG1-209ENST00000575659 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
ACTG1-209ENST00000575659 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
ACTG1-209ENST00000575659 CFTRP13569 1480 aa32■■■□□ 2.71
ACTG1-209ENST00000575659 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
ACTG1-209ENST00000575659 TRIM41Q8WV44 630 aa31.7■■■□□ 2.67
ACTG1-209ENST00000575659 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
ACTG1-209ENST00000575659 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
ACTG1-209ENST00000575659 OSCARQ8IYS5 282 aa31.58■■■□□ 2.65
ACTG1-209ENST00000575659 IFT140Q96RY7 1462 aa31.43■■■□□ 2.62
ACTG1-209ENST00000575659 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
ACTG1-209ENST00000575659 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.61
ACTG1-209ENST00000575659 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
ACTG1-209ENST00000575659 DNMBPQ6XZF7 1577 aa31.29■■■□□ 2.6
ACTG1-209ENST00000575659 EIF4G3O43432 1585 aaKnown RBP31.21■■■□□ 2.59
ACTG1-209ENST00000575659 RIMBP3CA6NJZ7 1639 aa31.13■■■□□ 2.57
ACTG1-209ENST00000575659 RIMBP3BA6NNM3 1639 aa31.13■■■□□ 2.57
ACTG1-209ENST00000575659 RIMBP3Q9UFD9 1639 aa31.13■■■□□ 2.57
ACTG1-209ENST00000575659 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.574e-13■■■■■ 34.6
ACTG1-209ENST00000575659 TARBP1Q13395 1621 aaKnown RBP31.12■■■□□ 2.57
ACTG1-209ENST00000575659 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
ACTG1-209ENST00000575659 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
ACTG1-209ENST00000575659 FBLN2P98095 1184 aa30.99■■■□□ 2.55
ACTG1-209ENST00000575659 RAD54L2Q9Y4B4 1467 aa30.99■■■□□ 2.55
ACTG1-209ENST00000575659 CHD1O14646 1710 aa30.98■■■□□ 2.55
ACTG1-209ENST00000575659 SOGA1O94964 1423 aa30.98■■■□□ 2.55
ACTG1-209ENST00000575659 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
ACTG1-209ENST00000575659 FGD5Q6ZNL6 1462 aa30.89■■■□□ 2.54
ACTG1-209ENST00000575659 CYB5RLQ6IPT4 315 aa30.86■■■□□ 2.53
ACTG1-209ENST00000575659 CUX1P39880 1505 aa30.85■■■□□ 2.53
ACTG1-209ENST00000575659 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
ACTG1-209ENST00000575659 SNAPC4Q5SXM2 1469 aa30.79■■■□□ 2.52
ACTG1-209ENST00000575659 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
ACTG1-209ENST00000575659 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
ACTG1-209ENST00000575659 ARAP1Q96P48 1450 aa30.71■■■□□ 2.51
ACTG1-209ENST00000575659 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
ACTG1-209ENST00000575659 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
ACTG1-209ENST00000575659 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
ACTG1-209ENST00000575659 CLASP1Q7Z460 1538 aa30.61■■■□□ 2.49
ACTG1-209ENST00000575659 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
ACTG1-209ENST00000575659 GAPVD1Q14C86 1478 aa30.59■■■□□ 2.49
ACTG1-209ENST00000575659 PBRM1Q86U86 1689 aa30.56■■■□□ 2.48
ACTG1-209ENST00000575659 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
ACTG1-209ENST00000575659 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
ACTG1-209ENST00000575659 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
ACTG1-209ENST00000575659 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.461e-8■□□□□ 10.4
ACTG1-209ENST00000575659 TOP2BQ02880 1626 aa30.34■■■□□ 2.45
ACTG1-209ENST00000575659 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
ACTG1-209ENST00000575659 GRIN2AQ12879 1464 aa30.3■■■□□ 2.44
ACTG1-209ENST00000575659 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
ACTG1-209ENST00000575659 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
ACTG1-209ENST00000575659 NUP160Q12769 1436 aa30.18■■■□□ 2.42
ACTG1-209ENST00000575659 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
ACTG1-209ENST00000575659 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
ACTG1-209ENST00000575659 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
ACTG1-209ENST00000575659 SHROOM2Q13796 1616 aa30.04■■■□□ 2.4
ACTG1-209ENST00000575659 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
ACTG1-209ENST00000575659 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
ACTG1-209ENST00000575659 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
ACTG1-209ENST00000575659 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms